CX077960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.386e-59 Identity = 130/237 (54.85%), Postives = 155/237 (65.40%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAALSPDKASILSELKPANGFISYTKPAVQAPAYASSTENIAKLLKGWTRNAQKSASSNSGVTDQNSINNNVNHIAGAESASSEETPSKVASNSTGIELSEAFESLFGFESFDSSNS 712 LLRCSKSCRLRWTNYLRPGIKRG+FT+ EEKMIIHLQALLGNRWAAIASYLP RTDNDIKNYWNTHLKKK+ KLQ G +D + D S + +S+GQWERRLQTDIHMAKQALC ALS DK S ++ P + T+P + SS ENIA+LL+ W + + +ASS S S + N+ + S SS PS+ A ++ F SF+SSNS Sbjct: 46 LLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPENGKCQDGNSSVD-----SDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTD-DPKLSTVQTTQPRPFQASTYSSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLSTSS---PSEGAIST-------------NFISFNSSNS 260
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28 Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV--RKLQLAAAGCSEDNSQYRDELASASS 292 LLRC KSCRLRW NYLRP +KRGNFTD+EE+ II L LLGN+W+ IA+ LP RTDN+IKN WNTHLKKKV R+ + A AG + + L+SA+S Sbjct: 48 LLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKKKAGAGSGDAGTPATAPLSSATS 146
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQI 301 LLRC KSCRLRW NYLRP +KRGNFTD E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+K+K L + G + +E + SSQ + Sbjct: 46 LLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRK-----LLSHGIDPQTHRQINESKTVSSQVV 140
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25 Identity = 68/166 (40.96%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV---------------------RKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAALSPDKASILSELKPANGFISYT 436 LLRC KSCRLRW NYLRP IKRGNF+ +EE IIHL LLGNRW+AIA+ LP RTDN+IKN W+THLKK++ + AAA + S R +S + ++ E I A ++CA S E + + F S T Sbjct: 46 LLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPAQGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSASSSVTESSMASSVAEEHGNAGISSASASVCAKEESSFTSASEEFQIDDSFWSET 211
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25 Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 214 LLRC KSCRLRW NYLRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+K+K+ Sbjct: 46 LLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKL 116
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25 Identity = 59/109 (54.13%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV-----RKLQLAAAGCSEDNSQYRDELASASSQQISRGQ 313 L RC KSCRLRW NYL P + RGNFTDQEE +II L LLGNRW+ IA +P RTDN +KNYWNTHL KK+ AA G S S+S Q+IS G+ Sbjct: 46 LKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTAVKAACGVESPPSMALITTTSSSHQEISGGK 154
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAA 370 LLRC KSCRLRW NYLRP +KRGNF+ +E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+++K+ + NS + + S + R + D AK A AA Sbjct: 46 LLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVTHRAINSDHAASNITISFESAQRDDKGAVFRRDAEPAKAAAAAA 168
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.234e-25 Identity = 48/71 (67.61%), Postives = 62/71 (87.32%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 214 LLRC KSCRLRW NYLRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+++K+ Sbjct: 46 LLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.234e-25 Identity = 48/71 (67.61%), Postives = 62/71 (87.32%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 214 LLRC KSCRLRW NYLRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+++K+ Sbjct: 46 LLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
BLAST of CX077960 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 48/71 (67.61%), Postives = 61/71 (85.92%), Query Frame = 2 Query: 2 LLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 214 L RC KSCRLRW NYLRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNTH+K+K+ Sbjct: 46 LQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116 The following BLAST results are available for this feature:
BLAST of CX077960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077960 ID=CX077960; Name=CX077960; organism=Citrus sinensis; type=EST; length=733bpback to top |