CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.502e-33
Identity = 85/248 (34.27%), Postives = 136/248 (54.84%), Query Frame = 2
Query:   74 CLYRNRSVSRTSETGSS----EPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-----TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSDVYSF 784
            C   NR +     T  S       +QP      +L IR A+ F  EEL  AT  FS+ + +G+G F  V+KG+L+DG +VA+K+   A      ++EF +E+  L+ + H +L+ LLGYC++ + + L+YE++ +GS+  HL+G     +++L +  R++I                P V+H+D K++N+L+DED  A+VAD GL + LG  D   P S++ A  + +L  E       + KSDVYSF
Sbjct:  454 CQCSNRELRLAKSTAYSFRKDNMKIQPDME---DLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGL-SILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSF 697          

HSP 2 Score: 24.2534 bits (51), Expect = 7.502e-33
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV LLE++SGR+A
Sbjct:  697 FGVVLLEILSGRKA 710          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.434e-32
Identity = 85/242 (35.12%), Postives = 126/242 (52.07%), Query Frame = 2
Query:   71 FCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            + L + +   R ++  +       G+N      +   + F  EELS  T NFSD N +G G +G+VYKG L +G ++AIK+      Q   EF  E+  L+ + H+N+V LLG+C +   Q L+YEYIPNGS+   L G + V   KL++  RL I                P ++H+D K+ N+L+DE   AKVAD GL   +G  + A  ++QV     +L  E     + +EKSDVY F
Sbjct:  583 YALRQKKRAQRATDQMNPFAKWDAGKNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGV---KLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGF 821          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.873e-32
Identity = 91/251 (36.25%), Postives = 134/251 (53.39%), Query Frame = 2
Query:   68 WFCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIRE--------ARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +FC YR++S++     G + P      N+   L  ++         + F +E + LAT+ +  K LIGEG FG VY+G L DG  VA+K R    TQ   EF +E+  L++IQH NLV LLGYC E + Q L+Y ++ NGS+   LYG     R+ L++  RLSI                R V+H+D K++N+L+D    AKVAD G   +  +   +  S +V     +L  E  + ++ SEKSDV+SF
Sbjct:  540 FFCRYRHKSITLEGFGGKTYPMAT---NIIFSLPSKDDFFIKSVSVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYG-EPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSF 784          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.081e-32
Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 2
Query:  179 ARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +R F  +E+  AT+NF  K +IG G FG VY+G L DG  VA+K    R       FI+EV  L+ I+H+NLV+  G+C E   Q L+YEY+  GS++ HLYGP +  R  L +  RL +                PR++H+D K++N+L+D+D  AKV+D GL     + D +  ++ V     +L  E     + +EKSDVYSF
Sbjct:  593 SRIFSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGP-RSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSF 795          

HSP 2 Score: 23.8682 bits (50), Expect = 8.081e-32
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            FGV LLEL+ GRE
Sbjct:  795 FGVVLLELICGRE 807          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.297e-32
Identity = 93/256 (36.33%), Postives = 128/256 (50.00%), Query Frame = 2
Query:   56 FFLSWFCLYRNRSVSRTSETGSSEPSVQPGRNVGIELS---------IREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F  S F LY+ R   +   + +  P    G ++G + S              R     +  AT NF +   IG G FG+VYKG L DG  VA+K+      Q   EF  E+  L+  +HR+LV+L+GYC ENN   LIYEY+ NG+V  HLYG    S   L +K RL I                + V+H+D K+AN+L+DE+F+AKVAD GL       D    S+ V     +L  E    ++ ++KSDVYSF
Sbjct:  420 FLGSCFVLYKKRKRGQDGHSKTWMPFSINGTSMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPS---LTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSF 672          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.071e-31
Identity = 79/205 (38.54%), Postives = 117/205 (57.07%), Query Frame = 2
Query:  182 RRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            R+F + E+  ATKNF D   IG G FG+VY+G L+DG L+AIK+      Q   EF  E+  L+ ++HR+LV+L+G+C E+N   L+YEY+ NG++  HL+G    +   L +K RL                  R ++H+D KT N+L+DE+F+AK++D GL       D    S+ V     +L  E    ++ +EKSDVYSF
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGS---NLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSF 707          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.533e-31
Identity = 89/248 (35.89%), Postives = 136/248 (54.84%), Query Frame = 2
Query:   68 WFCLYRNRSVS-----RTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +FC YR++S++     +T    ++     P ++     S+   + F +E +  AT+ +  K LIGEG FG VY+G L DG  VA+K R    TQ   EF +E+  L++IQH NLV LLGYC E + Q L+Y ++ NGS+   LYG +   R+ L++  RLSI                R V+H+D K++N+L+D+   AKVAD G   +  +   +  S +V     +L  E  + ++ SEKSDV+SF
Sbjct:  542 FFCRYRHKSITLEGFGKTYPMATNIIFSLPSKDDFFIKSV-SVKPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEAS-KRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSF 785          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.680e-31
Identity = 74/211 (35.07%), Postives = 124/211 (58.77%), Query Frame = 2
Query:  173 REARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-----TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSDVYSF 784
            R AR F  EEL  A   F +++++G+G F  VYKG+L+DG  VA+K+   +      + EF  E+  L+ + H +L++LLGYC+E   + L+YE++ +GS+  HL+G ++  +++L++  R++I                P V+H+D K++N+L+DE+  A+VAD GL + LG  D   P +++ A  + +L  E       + KSDVYSF
Sbjct:  495 RRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGL-SLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSF 704          

HSP 2 Score: 24.6386 bits (52), Expect = 6.680e-31
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV LLE++SGR+A
Sbjct:  704 FGVLLLEILSGRKA 717          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31
Identity = 86/249 (34.54%), Postives = 126/249 (50.60%), Query Frame = 2
Query:   68 WFCLYRNRSVSRTSETGSSEPSVQPGRNVG------IELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F LY+ R   +   + +  P    G            ++   + R  +  +  AT +F +   IG G FG+VYKG L DG  VA+K+      Q   EF  E+  L+  +HR+LV+L+GYC ENN   L+YEY+ NG++  HLYG   +S   L +K RL I                + V+H+D K+AN+L+DE+ +AKVAD GL       D    S+ V     +L  E    ++ +EKSDVYSF
Sbjct:  424 FFVLYKKRGRDQDGNSKTWIPLSSNGTTSSSNGTTLASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLS---LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSF 669          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31
Identity = 80/212 (37.74%), Postives = 117/212 (55.19%), Query Frame = 2
Query:  173 REARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRP---GAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI----FLASEVKEFRRFSEKSDVYSF 784
            + +R F   E++ AT NFS  NLIG G FGEV+K +L+DG + AIK+        T + ++EVR L  + HR+LV LLG C +  L  LIYE+IPNG++  HL+G S  + + L ++ RL I                P + H+D K++N+L+DE   AKV+D GL   +  T+ A   S +         +L  E     + ++KSDVYSF
Sbjct:  346 KSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSF 557          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
CRI4_MAIZE7.502e-3334.27Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5977_ARATH1.434e-3235.12Probable leucine-rich repeat receptor-like protein... [more]
NORK_PEA1.873e-3236.25Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5487_ARATH8.081e-3238.35Probable LRR receptor-like serine/threonine-protei... [more]
HERK_ARATH9.297e-3236.33Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y1357_ARATH2.071e-3138.54Probable receptor-like protein kinase At1g30570 OS... [more]
NORK_MEDTR3.533e-3135.89Nodulation receptor kinase OS=Medicago truncatula ... [more]
ACR4_ARATH6.680e-3135.07Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5597_ARATH7.870e-3134.54Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLQ_ARATH7.870e-3137.74Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
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