CX077881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30 Identity = 63/82 (76.83%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 391 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 636 MTF HVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29 Identity = 62/82 (75.61%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 391 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 636 MTF HV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29 Identity = 62/82 (75.61%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 391 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 636 MTF HV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.443e-28 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 391 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 636 MTF HVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+DGY LPKLYAK+ +CVSCAIH+H Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAH 82
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = -3 Query: 394 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 585 VK+IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY+ Y LPKLYAK+ YCVSCAIHS Sbjct: 18 VKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHS 81
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = -3 Query: 394 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 636 MTF HV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A Y Y LPKLY K+ YC++CAIHS Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHS 81
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = -3 Query: 394 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 585 VK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA ++D Y LPKLYAK+ YCVSCAIHS Sbjct: 18 VKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = -3 Query: 394 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 585 VK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY Y LPKLYAK+ YCVSCAIHS Sbjct: 18 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = -3 Query: 394 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 585 V+ IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CX077881 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = -3 Query: 394 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 585 V+ IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81 The following BLAST results are available for this feature:
BLAST of CX077881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077881 ID=CX077881; Name=CX077881; organism=Citrus sinensis; type=EST; length=680bpback to top |