CX077861

Overview
NameCX077861
Unique NameCX077861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX077861 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.033e-45
Identity = 68/105 (64.76%), Postives = 92/105 (87.62%), Query Frame = -3 
Query:  170 KAEAEKILQIKQAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIATQIREGLLQA 484
            K EAEKILQ+K+AE EAEAKYL G+G+ARQRQAI DGLR+++L FS  V GT++K+VMD++++TQYFDT+K++G SSK+++VFIPHGPG V+DI  QIR GL+++
Sbjct:   66 KGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170

HSP 2 Score: 52.7582 bits (125), Expect = 6.033e-45
Identity = 35/92 (38.04%), Postives = 43/92 (46.74%), Query Frame = -2 
Query:  576 QKNEIAKAVEEELEKVIFVKFGLFLFKATQELMSCPSFFFLG*AMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAGENLDPMNSYLSLAGKV 851
            QK E+AK+V EELEKV                            M  YGY I   L+VDI PD  V+RAMNEINA + +   + Y   A K+
Sbjct:    9 QKGEVAKSVLEELEKV----------------------------MGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKI 72
The following BLAST results are available for this feature:
BLAST of CX077861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO6.033e-4564.76Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_5E01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5E01-I1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077861 ID=CX077861; Name=CX077861; organism=Citrus sinensis; type=EST; length=852bp
CCCTTTTTTTCCCCCCATTGTGCAAGTAATAATATAACAAAGGACGGTGC
TTGGAATAAAATACTAATAAAGTTTAGATATTAGAAACACCAAATGCAGG
ACTATGATAAGCACTAGGACTAGTAAAGGACTTAGCATATCAGCAGAATA
TCTACTTCTGAACTTGATTGGCCTGAAGGAGTCCCTCCCTGATTTGTGTA
GCAATGTCCTTAACAGCACCAGGTCCATGTGGGATAAAAACAGATGAGGA
CTTCGAGGATGCTCCAATCTCCTTCATGGTGTCGAAGTATTGAGTCACCA
GAACCATGTCCATGACATCCTTGGAGGTTGTTCCAGGAACATTCTCAGAG
AAGGCAAGCACACTGTCTCTTAACCCATCAACAATAGCCTGGCGCTGACG
TGCTATCCCAAGTCCGGACAGGTATTTTGCCTCAGCCTCCCCTTCAGCTT
GTTTGATTTGCAATATCTTCTCTGCCTCAGCCTTCTCATTTGCTGCCAGC
CTCAGTCTTGCAGCTAGTCACATGCACAAGCAAAGCATCAAGCGTTCAAA
CAATTGGGATTATAAATTATATTCATACTTTTCCTGCGAGTGACAAGTAT
GAATTCATGGGATCTAAATTTTCACCTGCATTGATCTCATTCATTGCTCT
CTTTACATGAACATCTGGCTCAATATCCACAATAAGAGTCTGCACTATCT
CATACCCATAATGAGACATGGCCTAACCCAAAAAAAAAAAAGAAGGGCAG
GACATTAGCTCTTGGGTCGCTTTAAACAAAAACAATCCAAATTTCACAAA
TATTACCTTTTCGAGCTCCTCTTCAACGGCTTTGGCAATTTCATTCTTCT
GC
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