CX077860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.515e-48 Identity = 96/185 (51.89%), Postives = 130/185 (70.27%), Query Frame = -2 Query: 1 KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIE-NRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 549 +++ I+ L++V ENPL K +A I+L + ++ I++KPM Y+ DREEF QIKELL L +I+ S SPH +PAF+V AE+ RGK RMV+NY+ +NK T D Y LPNK+ L+ L++ K +S FDCKSGFWQ+ +++ S P TAF+ PQGHYEW V+PFGLK AP IFQ MD+ FR Sbjct: 208 RMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR 392
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.979e-48 Identity = 96/185 (51.89%), Postives = 130/185 (70.27%), Query Frame = -2 Query: 1 KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIE-NRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 549 +++ I+ L++V ENPL K +A I+L + ++ I++KPM Y+ DREEF QIKELL L +I+ S SPH +PAF+V AE+ RGK RMV+NY+ +NK T D Y LPNK+ L+ L++ K +S FDCKSGFWQ+ +++ S P TAF+ PQGHYEW V+PFGLK AP IFQ MD+ FR Sbjct: 208 RMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR 392
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.979e-48 Identity = 96/185 (51.89%), Postives = 130/185 (70.27%), Query Frame = -2 Query: 1 KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIE-NRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 549 +++ I+ L++V ENPL K +A I+L + ++ I++KPM Y+ DREEF QIKELL L +I+ S SPH +PAF+V AE+ RGK RMV+NY+ +NK T D Y LPNK+ L+ L++ K +S FDCKSGFWQ+ +++ S P TAF+ PQGHYEW V+PFGLK AP IFQ MD+ FR Sbjct: 208 RMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR 392
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.820e-48 Identity = 95/185 (51.35%), Postives = 129/185 (69.73%), Query Frame = -2 Query: 1 KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIE-NRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 549 +++ I+ L++V ENPL K +A I+L + ++ I++KPM Y+ DREEF QIKELL L +I+ S SPH +PAF+V AE+ RGK RMV+NY+ +NK T D Y PNK+ L+ L++ K +S FDCKSGFWQ+ +++ S P TAF+ PQGHYEW V+PFGLK AP IFQ MD+ FR Sbjct: 203 RMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR 387
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.857e-47 Identity = 94/185 (50.81%), Postives = 127/185 (68.65%), Query Frame = -2 Query: 1 KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIE-NRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 549 +++ + L++V ENPL K +A I+L + ++ I++KPM Y+ DREEF QIKELL L +I+ S SPH +PAF+V AE RG RMV+NY+ +NK T D Y LPNK+ L+ L++ K +S FDCKSGFWQ+ +++ S P TAF+ PQGHYEW V+PFGLK AP IFQ MD+ FR Sbjct: 209 RMQKTEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAENGRGNKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR 393
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CERV (Enzymatic polyprotein OS=Carnation etched ring virus GN=ORF V PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.016e-44 Identity = 94/182 (51.65%), Postives = 123/182 (67.58%), Query Frame = -2 Query: 28 YNINI-KLETIKSQLKQVYEENPLALWKPDH-PRAKIELIENR-IIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIF 564 Y I I K I+ L++V ENP+ K A IELI+ + ++++KPM Y+ DREEF QIKELL L +I+ S S H SPAF+V AE+ RGK RMV+NY+ +NK TK D + LPNK+ L+ LV+ K YS FDCKSG WQ+ +++ S TAF+ PQGHY+W V+PFGLK AP IF Sbjct: 184 YEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTVVKVKPMSYSPSDREEFDRQIKELLELKVIKPSKSTHMSPAFLVENEAERRRGKKRMVVNYKAMNKATKGDAHNLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLLTAFTCPQGHYQWNVVPFGLKQAPSIF 365
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_FMVD (Enzymatic polyprotein OS=Figwort mosaic virus (strain DxS) GN=ORF V PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43 Identity = 93/196 (47.45%), Postives = 130/196 (66.33%), Query Frame = -2 Query: 16 EKHYLISKGQSYNINIKLETIKSQLKQVYEENPLALWKPDH-PRAKIELIEN-RIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRM 597 E+++LI++ K + I+ L +V ENP+ K +A I+LI+ ++IR+KPM Y+ +DRE F QIKELL L LI S S H SPAF+V AE+ RGK RMV+NY+ +N+ T D + LPN + L+ L++ K+ +S FDCKSGFWQ+ ++E S TAF+ PQGH++W V+PFGLK AP IFQ M Sbjct: 193 ERYFLITE--------KYQKIEQLLDKVCSENPIDPIKSKQWMKASIKLIDPLKVIRVKPMSYSPQDREGFAKQIKELLDLGLIIPSKSQHMSPAFLVENEAERRRGKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHM 380
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 87/192 (45.31%), Postives = 113/192 (58.85%), Query Frame = -2 Query: 1 KSQLKQVYE-----ENPLALWKPDHPRAKIELIENRI-IRLKPMMY-TEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAE-------QVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFSTPQGHYEWLVMPFGLKNAPQIFQSRMDKIFR 534 K LK++ E ENP+ WK + + K+ +I I I +P+ + T D E QI LL + +IR S S H S AF+VR E + +GK RMV NY+ LN+ T+ D Y LP +I+ V YSKFD KSGFWQ+ MEE S+P+TAF YEWLVMPFGLKNAP IFQ +MD +F+ Sbjct: 1364 KDLLKEMKEMKYIGENPMEFWKNNKIKCKLNIINPDIKIMGRPIKHVTPGDEEAMTRQINLLLQMKVIRPSESKHRSTAFIVRSGTEIDPITGKEKKGKERMVFNYKLLNENTESDQYSLPGINTIISKVGRSKIYSKFDLKSGFWQVAMEEESVPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVFK 1555
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_SOCMV (Enzymatic polyprotein OS=Soybean chlorotic mottle virus GN=ORF V PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = -2 Query: 10 ETIKSQLKQVYEENPLALWKPDHP-----RAKIELIENRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFS-TPQGHYEWLVMPFGLKNAPQIFQSRMDK 543 +TI+ QL++V E+PL K + R K L E + P YT D +EFK + ++LL LIR S SPH++PAF V E RGK RMVINY+++N+ T D Y LP K+ ++ +K ++S D KSG++Q+++ EN+ P TAFS PQ HYEW V+ FGLK AP I+Q MD+ Sbjct: 166 KTIEEQLEEVCSEHPLDETKNKNGLLIEIRLKDPLQEINVTNRIP--YTIRDVQEFKEECEDLLKKGLIRESQSPHSAPAFYVENHNEIKRGKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQ 347
BLAST of CX077860 vs. ExPASy Swiss-Prot
Match: POL_CYLCV (Enzymatic polyprotein OS=Cestrum yellow leaf curling virus GN=ORF V PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.866e-32 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = -2 Query: 10 IKSQLKQVYEENPLALWKPDHPRAKIELI--ENRIIRLKPMMYTEEDREEFKIQIKELLGLNLIRNSNSPHNSPAFMVRKRAEQVRGKARMVINYRELNKYTKFDGYFLPNKEVLINLVKNKTYYSKFDCKSGFWQIKMEENSIPYTAFS-TPQGHYEWLVMPFGLKNAPQIFQSRMDK 537 + S L++V +ENPL + + KIELI E + + Y+ D EF + +L+ +I S SPH++PAF V E R K RMVINY+ LNK T + + LP + ++ VK ++S D KSG+WQ+++ S P TAFS PQ HY+W V+PFGLK AP I+Q+ MDK Sbjct: 168 VSSTLEEVCDENPLDVKNTNTELVKIELINPEKEVNVPNNIPYSLRDINEFSQECADLVRKGIIEESKSPHSAPAFYVENHNEIKRKKRRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLRLHPQSKPLTAFSCPPQKHYQWNVLPFGLKQAPGIYQNFMDK 346 The following BLAST results are available for this feature:
BLAST of CX077860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077860 ID=CX077860; Name=CX077860; organism=Citrus sinensis; type=EST; length=649bpback to top |