CX077857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD51_ORYSJ (Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.193e-35 Identity = 98/270 (36.30%), Postives = 134/270 (49.63%), Query Frame = 2 Query: 65 LMCQEDESCLSQESGDEKSCDGSYYCD-----PCCFVLGNGDEEFIEK----LVEKETDFGSKGYGFSHD------------CSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKL-WAIRLLSVACLSLAAKMEECQVPALSEFQV----DDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELVSRAVELIMTITKVINLMNHRPSXXXXXXXXXXSDGQLTRETIELKMN 796 LMCQED + L + G G D + DEE +E+ LV KE+ F S S + W AR ++WI R FGF RTAYL++ + DRF +R ID + WA RLL+VAC+SLAAKMEE + PALSEF+ D ++F I+RMELLVLSTLDW+M ++TPF +L +L + LI + + ++++HRPS + G LTRE +E KM+ Sbjct: 15 LMCQEDSTDLDDDGGGGGCFAGDGRADLLLVYNAAAAADDEDEEEVEEYMDHLVSKESSFCSSSSSTSSSSCCFSDAGGESAAAAAPMDWFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHGALTREALESKMS 284
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD53_ORYSJ (Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.212e-34 Identity = 91/228 (39.91%), Postives = 135/228 (59.21%), Query Frame = 2 Query: 65 LMCQEDESCL-SQESGDEKSCDGS------YYCDPCCFVLGNGDEEFIEKLVEKETDFGSKGYGFSHDCSTR--TQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELVSRAVELIMTITKVINLMNHRPS 721 L+C+ED + L S + D+ GS D +L + D+E++ ++ KE G G G D + W+K AR + WI A F F +TAY++V +LDRFL++R +D K WA++LLSVACLSLAAK+EE + P L EF++D +D + + RMELLVL+TL W+M + TPF++L+ F K + R K +V RA+E I KVI+ + ++PS Sbjct: 18 LICREDGNDLFSADPADDDGGGGSGGDWELSIADDDHVLLMDRDDEYLALMLSKERCAGGGGGGERGDEEEEEMVEEWMKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEFKLDMYDCAS--LMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDER-KAIVLRAIECIFASIKVISSVGYQPS 242
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD52_ORYSJ (Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.971e-33 Identity = 100/276 (36.23%), Postives = 138/276 (50.00%), Query Frame = 2 Query: 65 LMCQEDESCLSQESGDEKSCDGSYYCDPCCFVLGNGDEE---FIEKLVEKETDFGSKGYGFSHDCSTRTQ--------SWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSID-DGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDDFD-FENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL------------CGECRPKELVSRAVELIMTITKVINLMNHRPSXXXXXXXXXXSDG-QLTRETIELKM-NVFPLC 811 L CQED + L D+ DG + + +EE ++E++V KE F D + W + ARL A++WI R FGF RTAYL++ + DRF +R +D + WA RLLS+AC+S+AAKMEE Q PALSEF F + I+RMELLVLSTL W+MG++TPF FL F +L G + AV I + +++++RPS S G LT+E +E KM N+ P C Sbjct: 17 LTCQEDGADLGDGVVDDDD-DGDVFLFYNAVAAADDEEEEEEYVEQMVSKEASFCCSSSSSLFDAAAGDGYGDGDGDGDWFRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTKEALESKMSNLSPSC 291
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD51_ARATH (Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.737e-32 Identity = 101/252 (40.08%), Postives = 141/252 (55.95%), Query Frame = 2 Query: 68 MCQEDESCLSQESGDEKSCDGSYYCDPCCFVLGNGDEEFIEKLVEKETDFGSKGYGFSHDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSI--DDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVD-DFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECR--PKELV-SRAVELIMTITKVINLMNHR-----PSXXXXXXXXXXSDGQLTRETIELK 790 +C E ES L+++ D+++ + S +P F DE+++ LV KE F S T S RL AI+WI R FGFQ +TAY+++ + D FL KR I + WA+RLLSVACLSLAAKMEE VP LS++ D DF F+ VI++ ELL+LSTLDWKM ITPF + +YF+ K+ + K+LV R+ + ++ +TK I+ +R SD +LTRE I K Sbjct: 12 LCHESESSLNED--DDETIERSDKQEPH-FTTTIDDEDYVADLVLKEN------LRFETLPSKTTSS---SDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAAVTTLLASSSTSSDIRLTREEIANK 251
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.245e-30 Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 176 EEFIEKLVEKE------TDFGSKGYGFSHDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL-CGECRPKELVSRAVELIMTITKVINLMNHRPS 721 EE + LVE+E D+G + G D R +S +AI WI+ + F TAYL+V++LDRFLS+ + +G+ W +LLSVACLS+AAKMEE VP + Q+ + F FE + I RMELLVL+ L+W+M ++TPF+++ YF+ KL G P+ + R+ ELI+ I + RPS Sbjct: 75 EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRS-------EAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAGTGFLEFRPS 258
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.731e-30 Identity = 92/245 (37.55%), Postives = 126/245 (51.43%), Query Frame = 2 Query: 65 LMCQEDESCLSQESGDEKSCDGSYYCD-----------PCCFVLGNG----DEEFIEKLVEKETDFGSK--------GYGFSHDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPK-ELVSRAVELIMTITKVINLMNHRPS 721 L+C ED S + G+E+ + PC V G EE + +LVE E D + G D R R+DAI+WI+ + + F TA L+V++LDRFLS + DGK W +LL+VACLSLAAKMEE VP + QV + + FE K IQRMELLVLSTL W+M ++TPF+++ YF+ +L G P + ELI+ I + + RPS Sbjct: 14 LLCAEDSSSVLGFGGEEEEEEEDVVAGKRARCAGPPPPPCVDVAGVDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRV-------RMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIARGTECLGFRPS 251
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.832e-29 Identity = 79/189 (41.80%), Postives = 116/189 (61.38%), Query Frame = 2 Query: 176 EEFIEKLVEKETDFGSKGYGFSHDCSTRTQSW---LKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL--CGECRPKELVSRAVELIMTITKVINLMNHRPS 721 EE I ++VEKE K + S D R +S L R DA+ WI+ + F L++++LDRFLS + GK W ++LL+VACLSLAAK+EE +VP L + QV D F FE K +QRMELLVL+ L W++ +ITP +++ YF+ K+ C + L+SR++++I + TK I+ + RPS Sbjct: 44 EEIIMEMVEKE-----KQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPS 227
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.596e-28 Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 290 DAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELVS-RAVELIMTITKVINLMNH 712 +++ WI R++ GFQ TAYL+V ++DRF+S RS+ D WA +LL VACLSLAAKMEE P L + Q++ F FE + IQRMEL+VL LDW++ S+TPFAF+ +F K+ R +++ RA ++I++ + +NH Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPDHG-WASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRSSRILALRACQIILSAIHELEFLNH 269
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 4.428e-28 Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 242 HDCSTR--TQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVD--DFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKE-----LVSRAVELIMTITKVINLMNHRPS 721 HD +R T+S AR D++ WI +A + FQ TAYL+V+++DRFL R + + W ++LL+VACLSLAAKMEE VP+L +FQV + FE K I+RMELLVLS LDW++ S+TPF F+ +F K+ P +S A E+I++ K + + + PS Sbjct: 66 HDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKI----DPSGTFLGFFISHATEIILSNIKEASFLEYWPS 230
BLAST of CX077857 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 3.749e-27 Identity = 64/148 (43.24%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 284 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELVSRAVELIMTITKVINLMNHRPS 721 R A++WI A + F LS+++LDRFL+ + K WA +LL+V+CLSLA+KMEE VP + + QV+D F FE K I+RMELLV++TL+W++ ++TPF+F+ YF+ K+ G + L+ R+ I+ TK I ++ RPS Sbjct: 97 RNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHV-SENLIYRSSRFILNTTKAIEFLDFRPS 243 The following BLAST results are available for this feature:
BLAST of CX077857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX077857 ID=CX077857; Name=CX077857; organism=Citrus sinensis; type=EST; length=817bpback to top |