CX077850

Overview
NameCX077850
Unique NameCX077850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.735e-56
Identity = 101/128 (78.91%), Postives = 114/128 (89.06%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            +I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:   21 VICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.609e-56
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:   21 IIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.918e-55
Identity = 102/128 (79.69%), Postives = 111/128 (86.72%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:   21 IIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.288e-55
Identity = 101/128 (78.91%), Postives = 112/128 (87.50%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   21 IIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.243e-54
Identity = 100/128 (78.12%), Postives = 109/128 (85.16%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:   21 IISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.624e-54
Identity = 102/128 (79.69%), Postives = 110/128 (85.94%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:   22 IISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.120e-54
Identity = 99/128 (77.34%), Postives = 111/128 (86.72%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:   21 IIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.769e-54
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   21 IIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.724e-54
Identity = 98/128 (76.56%), Postives = 109/128 (85.16%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:   21 IISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148
[Close]
BLAST of CX077850 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.223e-53
Identity = 100/128 (78.12%), Postives = 110/128 (85.94%), Query Frame = 2 
Query:    2 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 385
            II RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP +SA GTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH  IYE
Sbjct:   17 IISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGRNVIHGSDAVESARKEIALWFPEGIAEWQSSLHSCIYE 144
The following BLAST results are available for this feature:
BLAST of CX077850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH1.735e-5678.91Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI8.609e-5679.69Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDKA_FLABI1.918e-5579.69Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_TOBAC7.288e-5578.91Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK1_MESCR1.243e-5478.13Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK1_SOYBN1.624e-5479.69Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK_HELAN2.120e-5477.34Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN2.769e-5478.13Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL4.724e-5476.56Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK_SOLLC5.223e-5378.13Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_5D06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5D06-G11-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077850 ID=CX077850; Name=CX077850; organism=Citrus sinensis; type=EST; length=607bp
AATCATCATCAGATTTGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGC
TTATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCA
TCGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGT
TGTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTA
TTATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGT
GATTTGGCTATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGT
TGAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTA
ACTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGG
TTGAGGAGCCTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCC
TATTTCCTTATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATT
GAGTTAAATTGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTG
GTTGCCATATACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAA
AAAAAAA
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