EY702299

Overview
NameEY702299
Unique NameEY702299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702299_ssr483 microsatellite EY702299_ssr483:483..494. BLAST: Citrus ESTs to Prunus persica proteins V1
EY702299_ssr538 microsatellite EY702299_ssr538:538..549. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.597e-84
Identity = 161/224 (71.88%), Postives = 172/224 (76.79%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRA---EGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RSSIKAV I KVAVYPGNVLALHMSKP  ++YKSGQYMFVNCAAVSPFEWHPFSITSAP DD+LSVHIRTLGDWTRQL+TVFSEVC+PPPNG SGLLRA   +G NNP+FPRVLIDGPYGAPAQDYK+YEVVLLVGLGIGATPMISIVKDIVNNMKA+     N LENG                           + F TRRAY Y VTR+QGSF W  G
Sbjct:  600 RAFRSSIKAVKILKVAVYPGNVLALHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDHLSVHIRTLGDWTRQLKTVFSEVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGPYGAPAQDYKQYEVVLLVGLGIGATPMISIVKDIVNNMKAM-DEEENSLENGNGMSNAAQNASPNMAQKRGKSSSASGGNSFNTRRAYFYWVTREQGSFDWFKG 822          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 5.194e-83
Identity = 154/221 (69.68%), Postives = 172/221 (77.83%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAE---GHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHW 659
            R  RSSIKAV+I+KVAVYPGNVLA+H+S+P  F+YKSGQYMFVNCAAVSPFEWHPFSITSAP DDYLSVHIR LGDWTR L+ VFSEVC+PPP G+SGLLRA+   G NNPDFP+VLIDGPYGAPAQDYK+YEVVLLVGLGIGATPMISIVKDIVNN+KA      N +ENG                         +++ FRTRRAY Y VTR+QGSF W
Sbjct:  584 RAFRSSIKAVTIRKVAVYPGNVLAIHLSRPQNFKYKSGQYMFVNCAAVSPFEWHPFSITSAPQDDYLSVHIRVLGDWTRALKGVFSEVCKPPPAGVSGLLRADMLHGANNPDFPKVLIDGPYGAPAQDYKKYEVVLLVGLGIGATPMISIVKDIVNNIKAKEQAQLNRMENGTS------------------EPQRSKKESFRTRRAYFYWVTREQGSFDW 786          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.584e-74
Identity = 144/222 (64.86%), Postives = 163/222 (73.42%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAE-GHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RSSIK V + KVAVYPGNVL+LHM+KP  F+YKSGQ+M VNC AVSPFEWHPFSITSAP DDYLSVHIRTLGDWTR+LRTVFSEVC+PP  G SGLLRA+ G  N  FP+VLIDGPYGAPAQDYK+Y+VVLLVGLGIGATPMISI+KDI+NNMK       +D+EN                        +     F+TR+AY Y VTR+QGSF W  G
Sbjct:  607 RAFRSSIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDGNLPFPKVLIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIINNMKG--PDRDSDIENNN---------------------SNNNSKGFKTRKAYFYWVTREQGSFEWFKG 805          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.269e-69
Identity = 133/221 (60.18%), Postives = 161/221 (72.85%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHN---NPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHW 659
            R  RSS++AVS+ KVAV PGNVL+LH+S+P  FRYKSGQYM++NC+AVS  EWHPFSITSAP DDYLSVHIR LGDWT+QLR++FSEVC+P P     L RA+  +    PDFPR+LIDGPYGAPAQDYK++EVVLLVGLGIGATPMISIV DI+NN+K +      +  N R +  +                  R+ + FRT+RAY Y VTR+QGSF W
Sbjct:  576 RAFRSSVEAVSVLKVAVLPGNVLSLHLSRPSNFRYKSGQYMYLNCSAVSTLEWHPFSITSAPGDDYLSVHIRVLGDWTKQLRSLFSEVCKPRPPDEHRLNRADSKHWDYIPDFPRILIDGPYGAPAQDYKKFEVVLLVGLGIGATPMISIVSDIINNLKGV-----EEGSNRRQSPIHNMVTPPVSP--------SRKSETFRTKRAYFYWVTREQGSFDW 783          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.382e-66
Identity = 129/224 (57.59%), Postives = 156/224 (69.64%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAE---GHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RS  KAV I KVAVYPGNV+A+HMSKP  F+Y SGQY+FVNC+ VS F+WHPF+I+SAP DDYLS+HIRTLGDWT QL+T+FS+VC PP    SGLLRA+       P  P++LIDGPYGAPAQDYK+Y+VVLLVGLGIGATP+ISIVKD++NN+K        ++E+G                         +R  F T+RAY Y VTR+QGSF W  G
Sbjct:  554 RAFRSGYKAVKILKVAVYPGNVMAVHMSKPQGFKYTSGQYIFVNCSDVSSFQWHPFTISSAPGDDYLSMHIRTLGDWTSQLKTLFSKVCEPPTGDQSGLLRADVAKADYKPRLPKLLIDGPYGAPAQDYKKYDVVLLVGLGIGATPLISIVKDVLNNIK-----QQKNIEDGTKGS---------------------KRSPFATKRAYFYWVTREQGSFEWFKG 751          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHF_ARATH (Respiratory burst oxidase homolog protein F OS=Arabidopsis thaliana GN=RBOHF PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.285e-65
Identity = 124/221 (56.11%), Postives = 154/221 (69.68%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RS   +V + KVA+YPGNVL L MSKP +FRYKSGQYMFV C AVSPFEWHPFSITSAP+DDY+S+HIR LGDWT++L+ VFSEVC PP  G SGLLRA+       P++LIDGPYGAPAQDY++Y+V+LLVGLGIGATP ISI+KD++NN+  +     +  +  R + ++                  RR+   +T  AY Y VTR+QGSF W  G
Sbjct:  618 RYFRSGSYSVRLLKVAIYPGNVLTLQMSKPTQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPEDDYISIHIRQLGDWTQELKRVFSEVCEPPVGGKSGLLRADETTKKSLPKLLIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIVKMEEHADSISDFSRSSEYSTGSNGDTP----------RRKRILKTTNAYFYWVTREQGSFDWFKG 828          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.053e-64
Identity = 135/221 (61.09%), Postives = 150/221 (67.87%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RSS+K V I KVA+Y GNVL L MSKP  F YKSGQYMFVNCAAVSPFEWHPFSITSAP D+YLSVHIR +GDWT +LR VFSE   P P G SGL+     +  ++P+VLIDGPYGAPAQDYKEYEV+LLVGLGIGATPMISIVKDIVNNMK       +DLE    +G                      R  F  +R Y Y VTR+QGSF W  G
Sbjct:  549 RAFRSSVKDVKILKVAMYTGNVLTLQMSKPQGFNYKSGQYMFVNCAAVSPFEWHPFSITSAPGDEYLSVHIRIVGDWTTKLRDVFSE---PSPTGRSGLVADYLQDKINYPKVLIDGPYGAPAQDYKEYEVLLLVGLGIGATPMISIVKDIVNNMK--EEKYDHDLEKKTVSGSG--------------------RSNF--KRVYFYWVTREQGSFDWFKG 742          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHA_SOLTU (Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.052e-63
Identity = 123/221 (55.66%), Postives = 151/221 (68.33%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHWV*G 668
            R  RS +  V + KVA+YPGNVL L MSKP +FRYKSGQYMFV C AVSPFEWHPFSITSAP DDYLS+HIR LGDWT++L+ VFSE C  P  G SGLLRA+ +     P++LIDGPYGAPAQDY++Y+V+LLVGLGIGATP ISI+KD++ N+  +      DL +   +G +                  +R+   +T  AY Y VTR+QGSF W  G
Sbjct:  630 RFFRSGLYTVRLLKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSIHIRQLGDWTQELKRVFSEACEQPEAGKSGLLRADENTKTSLPKLLIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLKNI--VTMEEQADLVSD-FSGNSDMSAATSEQPALNKISPKKRKSTLKTTNAYFYWVTREQGSFDWFKG 847          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.298e-61
Identity = 122/232 (52.59%), Postives = 147/232 (63.36%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSE--------------VCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHW 659
            R  RSSI+ V + K+A YPG VL L MSKP  F+Y SGQYMFVNC AVSPFEWHPFSITS P DDYLSVHI+ LGDWT  ++ VFSE              V +PPP G        G N+P FP+++IDGPYGAPAQDYK+YEVVLL+GLGIGATPMISI+KDI+NN +       + +E G                          ++ F+TRRAY Y VT++QG+F W
Sbjct:  537 RAFRSSIRTVKVLKMAAYPGKVLTLQMSKPTNFKYMSGQYMFVNCPAVSPFEWHPFSITSTPQDDYLSVHIKALGDWTEAIQGVFSESREKIVEKHHVIFQVSKPPPVGD----MLNGANSPRFPKIMIDGPYGAPAQDYKKYEVVLLIGLGIGATPMISIIKDIINNTET--KEQLSQMEKG------------------SPQEQQGNKETFKTRRAYFYWVTKEQGTFDW 744          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: RBOHB_ARATH (Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.179e-60
Identity = 117/221 (52.94%), Postives = 150/221 (67.87%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRA---EGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIXXXXXNDLENGRDTGFNXXXXXXXXXXXXXXXXGHRRRDQFRTRRAYSYCVTRDQGSFHW 659
            R  R   KAV + KVAVYPGNVL+L+MSKP  F+Y SGQY+++NC+ VSP +WHPFSITSA  DDYLSVHIRTLGDWT QL++++S+VC+ P    SGL  A   + +N   FPR+LIDGPYGAPAQDY+ Y+V+LLVGLGIGATP+ISI++D++NN+K       N +E G +                        ++   T+RAY Y VTR+QGS  W
Sbjct:  530 RAFRPGAKAVKVLKVAVYPGNVLSLYMSKPKGFKYTSGQYIYINCSDVSPLQWHPFSITSASGDDYLSVHIRTLGDWTSQLKSLYSKVCQLPSTSQSGLFIADIGQANNITRFPRLLIDGPYGAPAQDYRNYDVLLLVGLGIGATPLISIIRDVLNNIK-----NQNSIERGTN---------------------QHIKNYVATKRAYFYWVTREQGSLEW 724          
The following BLAST results are available for this feature:
BLAST of EY702299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RBOHC_SOLTU3.597e-8471.88Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHC_ARATH5.194e-8369.68Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHD_ARATH2.584e-7464.86Respiratory burst oxidase homolog protein D OS=Ara... [more]
RBOHA_ARATH3.269e-6960.18Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHB_SOLTU3.382e-6657.59Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHF_ARATH1.285e-6556.11Respiratory burst oxidase homolog protein F OS=Ara... [more]
RBOHD_SOLTU7.053e-6461.09Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHA_SOLTU2.052e-6355.66Respiratory burst oxidase homolog protein A OS=Sol... [more]
RBOHG_ARATH7.298e-6152.59Putative respiratory burst oxidase homolog protein... [more]
RBOHB_ARATH6.179e-6052.94Respiratory burst oxidase homolog protein B OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702299 ID=EY702299; Name=EY702299; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCTGAGGTCAAGCATTAAGGCAGTTTCCATACAAAAGGTG
GCTGTTTATCCTGGAAATGTGCTGGCTCTTCACATGTCAAAGCCAGATAG
ATTCAGATACAAGAGCGGGCAGTACATGTTTGTCAATTGTGCTGCTGTGT
CTCCATTCGAATGGCACCCATTTTCAATAACTTCTGCCCCGGATGATGAC
TACCTCAGTGTTCACATTAGAACTCTTGGTGACTGGACTCGTCAACTCAG
AACAGTTTTCTCAGAGGTATGCCGACCACCTCCAAACGGAATAAGTGGAC
TCCTCCGAGCCGAGGGACATAACAATCCTGATTTTCCTAGAGTTTTGATT
GACGGTCCATATGGAGCTCCAGCACAAGACTACAAAGAGTATGAGGTGGT
TTTATTAGTTGGTCTGGGAATTGGAGCAACTCCGATGATCAGCATTGTTA
AAGACATAGTGAACAACATGAAAGCCATAGAGGAAGAAGAAGAAAATGAT
TTAGAAAACGGTCGTGACACCGGCTTTAACACAACAACATCATCATCATC
GACAACAACTACGAGCCCTTCTTCTTCTGGACACAGAAGAAGGGACCAAT
TCAGGACAAGAAGAGCATACTCCTATTGCGTTACAAGAGACCAAGGCTCG
TTCCATTGGGTTTAAGGGAGGGATGAATGAGGGGGCTGAATTGAACACAA
CAATGGCTAGAAGTTCACAAATACGGGCCAGGGGATATGAAAAAGGGGAG
GTCCCTCAGATCTCATTGCATGCTTGAGCCCCCAATCCGCCAAAAGGCGC
TGAAGCTGGGCTGGAACACCGTTAAGGCCATTTCCAGAAGCTAATGGGAC
CAGTGGACCAAC
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