CX077761

Overview
NameCX077761
Unique NameCX077761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.835e-53
Identity = 120/217 (55.30%), Postives = 146/217 (67.28%), Query Frame = 2
Query:   77 MASTVSTQMRLHSPALIFQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKA-PSVKYRRMFCVNSMAKD----VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            MAS+ S QM +H+         S+ +A +     +  ++ +++        + SG AL+SR HYAS  PI Q S    + K++R  CV SMA +    +E QAKVT KV+FDV+IGG+ AGRIVMGLFG+VVPKT ENFRALCTGEK YGYKG SFHRIIKDFMIQ            ISIYG+ FEDE+F LKH GPG+LSMANAGPNTNGSQFFI
Sbjct:    1 MASSSSMQM-VHT---------SRSIAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYAS--PIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFI 205          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49
Identity = 99/156 (63.46%), Postives = 115/156 (73.72%), Query Frame = 2
Query:  248 LTSRSHYASSFPIVQLSKAPSVKYRRMFCVNSMAKDV-ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            L+S  HYA    + Q SKA S+  RR+ C +    +V ELQAKVT+K+FFD++IGG+ AGRIV+GLFGD VPKT ENF+ L TG KGYGY+G  FHRII +FMIQ            +SIYGS FEDESF LKHVGPGVLSMANAGPNTNGSQFFI
Sbjct:   37 LSSTYHYAPRLSVSQQSKAKSITSRRITCASGAQGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFI 192          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.748e-41
Identity = 99/203 (48.77%), Postives = 126/203 (62.07%), Query Frame = 2
Query:  167 MLPMTSSITNSQSGHCPASTLK-LSGRALTSRSH------------YASSFPIVQLSKAPSVKY----RRMFCVNSMAKDV-ELQAKVTTKVFFDVDIG---GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            M  ++ +++N +S   P   L  ++  A TS S             ++SS P    S      Y     R F V S A+ V E Q+K+T KV+FD+ +G   GK AGRIV+GL+GD VP+T ENFRALCTGEKG+GYKG +FHR+I+DFMIQ             S+YG +F+DE+F L HVGPGVLSMANAGPNTNGSQFFI
Sbjct:    1 MATLSMTLSNPKSLSAPPRRLSPINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTKRNHRCFSVQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFI 203          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.850e-38
Identity = 76/110 (69.09%), Postives = 83/110 (75.45%), Query Frame = 2
Query:  383 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            KVFFDV    KP GRIVM L  DVVP+TAENFRALCTGEKG+GYKGCSFHR+I +FM+Q             SIYG+ F DE+F LKH GPG LSMANAGPNTNGSQFFI
Sbjct:    5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFI 114          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 75/109 (68.81%), Postives = 82/109 (75.23%), Query Frame = 2
Query:  386 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            V+ DVD  GKP GR+V+ L  DVVPKTAENFRALCTGEKG+GYKG +FHR+I  FM Q             SIYGS F DE+F LKHVGPGVLSMANAGPNTNGSQFFI
Sbjct:   48 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFI 156          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 78/113 (69.03%), Postives = 84/113 (74.34%), Query Frame = 2
Query:  374 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            VT KVFFDV IG K  GRIV+GLFG VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ            ISIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFI 148          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 77/113 (68.14%), Postives = 84/113 (74.34%), Query Frame = 2
Query:  374 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            VT KVFFDV IG K  GRIV+GLFG VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ            +SIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFI 148          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 2
Query:  344 MAKDVELQA-KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            M + VE +  K+T+KV+FD++  G+P GRIVMGL+G  VPKTAENFRAL TGEKG+GY+G +FHR+IKDFMIQ             SIYG+ FEDE+F L+H   GVLSMANAG +TNGSQFFI
Sbjct:   22 MGQTVEAKGPKITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFI 145          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 77/113 (68.14%), Postives = 85/113 (75.22%), Query Frame = 2
Query:  374 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            VT KVFFDV IG K  GRIV+GLFG+VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ            +SIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI
Sbjct:   36 VTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFI 148          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 74/114 (64.91%), Postives = 84/114 (73.68%), Query Frame = 2
Query:  371 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            KVT KV+FD+  G K  GRIV+GL+G+VVPKT ENFRAL TGEKGYGYK   FHR+IKDFMIQ             SIYG  F DE+F L+H GPG+LSMANAG +TNGSQFFI
Sbjct:   27 KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFI 140          
The following BLAST results are available for this feature:
BLAST of CX077761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
CP20C_ARATH1.835e-5355.30Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPB_VICFA2.741e-4963.46Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
CP20B_ARATH2.748e-4148.77Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIA1_RHIOR4.850e-3869.09Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_HUMAN4.106e-3768.81Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIC_BOVIN4.106e-3769.03Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIC_HUMAN5.363e-3768.14Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_ARTBE7.004e-3761.29Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIC_MOUSE1.195e-3668.14Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIB_ORPSP1.195e-3664.91Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_58H02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-58H02-P3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077761 ID=CX077761; Name=CX077761; organism=Citrus sinensis; type=EST; length=713bp
CTTCTTATTAGTTATCACTGGCTGCAGGCTCCAGCTGCGGCGAATTTGGG
CGACCCCTATTACCTAATCCATTGTTATGGCTTCTACTGTCTCTACTCAG
ATGCGGCTACATAGCCCCGCCCTCATTTTCCAGGGCAGTTATAGCCAAGG
TGTTGCAAATGTTTGTATGCTACCTATGACGTCTAGCATTACAAATTCGC
AGTCAGGTCATTGCCCAGCTTCTACTTTGAAGTTGTCTGGAAGAGCATTG
ACATCAAGATCCCACTATGCATCAAGCTTTCCCATCGTACAGCTTTCTAA
AGCACCTTCTGTTAAGTATCGAAGAATGTTCTGTGTCAACTCAATGGCAA
AGGATGTAGAGCTGCAAGCAAAAGTGACAACCAAAGTTTTCTTTGACGTA
GATATTGGAGGTAAACCTGCAGGTAGAATAGTAATGGGCCTTTTTGGAGA
TGTTGTTCCGAAAACAGCTGAGAACTTTCGTGCACTGTGTACAGGTGAGA
AAGGATATGGTTACAAAGGATGCTCCTTCCACCGTATTATTAAAGATTTT
ATGATCCAGGGAGGGGACTTCACTGAGGGAGATGGAACTGGAGGCATCAG
TATTTATGGTTCCAGCTTTGAAGATGAGAGCTTTGTCTTGAAGCATGTTG
GACCTGGAGTATTAAGCATGGCCAATGCAGGTCCTAATACCAATGGGAGC
CAATTTTTCATTT
back to top