CX077760

Overview
NameCX077760
Unique NameCX077760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.921e-71
Identity = 136/192 (70.83%), Postives = 150/192 (78.12%), Query Frame = -1
Query:  203 KYRRMFCVNSMAKD----VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLDA 766
            K++R  CV SMA +    +E QAKVT KV+FDV+IGG+ AGRIVMGLFG+VVPKT ENFRALCTGEK YGYKG SFHRIIKDFMIQ           GISIYG+ FEDE+F LKH GPG+LSMANAGPNTNGSQFFICTVKT WLDN+HVVFG VI+GM +VR LES ET   D PK  CRI   GELPLDA
Sbjct:   69 KHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGELPLDA 260          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.603e-69
Identity = 131/187 (70.05%), Postives = 150/187 (80.21%), Query Frame = -1
Query:  206 RRMFCVNSMAKDV-ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD-YPKVPCRIINSGELPLD 760
            RR+ C +    +V ELQAKVT+K+FFD++IGG+ AGRIV+GLFGD VPKT ENF+ L TG KGYGY+G  FHRII +FMIQ           G+SIYGS FEDESF LKHVGPGVLSMANAGPNTNGSQFFICTV TPWLDNRHVVFGHVI+G+DVV++LES ETS+ D  PK PC+I  SGELPLD
Sbjct:   61 RRITCASGAQGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSGELPLD 247          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.565e-59
Identity = 115/187 (61.50%), Postives = 141/187 (75.40%), Query Frame = -1
Query:  209 RMFCVNSMAKDV-ELQAKVTTKVFFDVDIG---GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 757
            R F V S A+ V E Q+K+T KV+FD+ +G   GK AGRIV+GL+GD VP+T ENFRALCTGEKG+GYKG +FHR+I+DFMIQ           G S+YG +F+DE+F L HVGPGVLSMANAGPNTNGSQFFICT+KT WLD RHVVFG VI+GM+VV+ +E  ET R D P+    I + G+LP+
Sbjct:   70 RCFSVQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPM 256          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.273e-58
Identity = 114/173 (65.90%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  206 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEK------GYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 706
            +T KV+FD++ GGKP GRIVMGL+G  VPKTAENFRAL TG+       GYGY+G SFHRIIK+FMIQ           G SIYGS F DE+F LKH GPGVLSMANAG +TNGSQFFICTVKT WLDNRHVVFGHV++GMDVV  +E+V+TSR D P  P  I  SGELP++
Sbjct:   43 ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGELPIE 215          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.747e-53
Identity = 104/167 (62.28%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  209 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 709
            KVT KV+FD+  G K  GRIV+GL+G+VVPKT ENFRAL TGEKGYGYK   FHR+IKDFMIQ           G SIYG  F DE+F L+H GPG+LSMANAG +TNGSQFFI TV T WLD RHVVFG VI+GMDVV  +E+ +T   D P  P  I + GELP+
Sbjct:   27 KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGELPV 193          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52
Identity = 98/165 (59.39%), Postives = 123/165 (74.55%), Query Frame = -1
Query:  215 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 709
            K+T+KVFFD++ G KP GR+V+GL+G  VPKTAENFRAL TGEKG+GY+G +FHR+IKDFMIQ           G SIYG  F DE+F L+H   G+LSMANAG +TNGSQFFI TV TPWLD RHVVFG V++G ++V ++E+V   R+D P    +I+ SGEL
Sbjct:   32 KITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKIVKSGEL 196          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.037e-52
Identity = 98/139 (70.50%), Postives = 110/139 (79.14%), Query Frame = -1
Query:  278 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLES 694
            V+ DVD  GKP GR+V+ L  DVVPKTAENFRALCTGEKG+GYKG +FHR+I  FM Q           G SIYGS F DE+F LKHVGPGVLSMANAGPNTNGSQFFICT+KT WLD +HVVFGHV +GMDVV+K+ES
Sbjct:   48 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIES 186          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52
Identity = 102/178 (57.30%), Postives = 125/178 (70.22%), Query Frame = -1
Query:  206 SMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 739
            S+A D +   KVT KV+FD+ IG +  GR+V GLFG  VPKT +NF AL TGEKG+GYK   FHR+IKDFMIQ           G SIYG  F DE+F LKH GPG +SMANAG +TNGSQFFI TVKT WLD +HVVFG V++GMDVVRK+ES +T   D P     I++SG++ ++
Sbjct:   31 SVANDKKKGPKVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGKIEVE 208          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 104/164 (63.41%), Postives = 115/164 (70.12%), Query Frame = -1
Query:  215 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 706
            VT KVFFDV IG K  GRIV+GLFG VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ           G+SIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI   K  WLD +HVVFG VIDGM VV  +E   T   D P   C IINSG++
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKI 199          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.154e-51
Identity = 110/181 (60.77%), Postives = 125/181 (69.06%), Query Frame = -1
Query:  209 KDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 730
            K  E   ++T KV+FDV+I GK AGRIVMGLFG  VPKT ENFRALCTGEKG G       YKG SFHRII  FM+Q           G SIYG  F DE+F LKH GPG LSMANAG +TNGSQFFI TV T WLD RHVVFG V+ GMDVV K+E+ E +++  PK    I++SGELPL
Sbjct:   25 KSKENLKEITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEA-EGNQSGTPKSKVVIVDSGELPL 204          
The following BLAST results are available for this feature:
BLAST of CX077760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
CP20C_ARATH2.921e-7170.83Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPB_VICFA1.603e-6970.05Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
CP20B_ARATH2.565e-5961.50Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIB_CRYNE1.273e-5865.90Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ORPSP2.747e-5362.28Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIB_ASPNG1.780e-5259.39Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIF_HUMAN3.037e-5270.50Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_MOUSE5.180e-5257.30Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIC_HUMAN8.836e-5263.41Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CP20A_ARATH1.154e-5160.77Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_58H02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-58H02-P3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077760 ID=CX077760; Name=CX077760; organism=Citrus sinensis; type=EST; length=766bp
TTTTTTTCAACCGAACAATAGTACATATTCAGCTCTACCATGAGCTTACC
GAGTATTATTCTTGAGTTTCTCAGCTAATTCAACTAAGCGGAACATGCTT
TCATGTAGATAACAGTTACAAAAACCATTTGGCTCCACAAAAGTGATGAA
TTACAAAAGTCGTATTTTATGGTTGTGGTAAGATATCAGAGCTGGCAGAT
CAGGCATCTAATGGTAGTTCTCCACTATTGATAATTCTACATGGCACCTT
TGGGTAATCTGTCCTGCTTGTCTCTACAGATTCAAGTTTCCTCACAACGT
CCATTCCATCAATGACATGTCCAAACACAACATGGCGGTTGTCCAACCAT
GGTGTCTTCACTGTGCAAATGAAAAATTGGCTCCCATTGGTATTAGGACC
TGCATTGGCCATGCTTAATACTCCAGGTCCAACATGCTTCAAGACAAAGC
TCTCATCTTCAAAGCTGGAACCATAAATACTGATGCCTCCAGTTCCATCT
CCCTCAGTGAAGTCCCCTCCCTGGATCATAAAATCTTTAATAATACGGTG
GAAGGAGCATCCTTTGTAACCATATCCTTTCTCACCTGTACACAGTGCAC
GAAAGTTCTCAGCTGTTTTCGGAACAACATCTCCAAAAAGGCCCATTACT
ATTCTACCTGCAGGTTTACCTCCAATATCTACGTCAAAGAAAACTTTGGT
TGTCACTTTTGCTTGCAGCTCTACATCCTTTGCCATTGAGTTGACACAGA
ACATTCTTCGATACTT
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