EY702292

Overview
NameEY702292
Unique NameEY702292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702292 vs. ExPASy Swiss-Prot
Match: UGDH_SOYBN (UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.230e-48
Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 2
Query:  176 KDAHGVCILTEWDEFNTLDYHRIYDNMTEPAFVFDGRNVGDADELREIGFIVYCHWGSSSHPWLKDMTGVA 388
            KDAHG+CILTEWDEF TLDY +I+DNM +PAFVFDGRN+ DAD+LREIGFIVY   G    PWLKDM  VA
Sbjct:  411 KDAHGLCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIVDADKLREIGFIVY-SIGKPLDPWLKDMPAVA 480          

HSP 2 Score: 101.679 bits (252), Expect = 8.230e-48
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 1
Query:    7 GRQARSSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMAKQVSVGWDAYEATK 177
            G +A  SIYDPQVTEDQIQRDL+MNKFDWDHP+HLQP SPT  K+VSV WDAYEATK
Sbjct:  355 GDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPTTVKKVSVVWDAYEATK 411          
BLAST of EY702292 vs. ExPASy Swiss-Prot
Match: UGDH1_ARATH (Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidopsis thaliana GN=UGD1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.794e-45
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1
Query:   13 QARSSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMAKQVSVGWDAYEATK 177
            +AR SIYDPQVTEDQIQRDL+MNKFDWDHPLHLQPMSPT  KQV+V WDAYEATK
Sbjct:  357 KARLSIYDPQVTEDQIQRDLSMNKFDWDHPLHLQPMSPTTVKQVTVTWDAYEATK 411          

HSP 2 Score: 98.2117 bits (243), Expect = 2.794e-45
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = 2
Query:  176 KDAHGVCILTEWDEFNTLDYHRIYDNMTEPAFVFDGRNVGDADELREIGFIVYCHWGSSSHPWLKDMTGVA 388
            KDAHG+CI+TEWDEF  LD+ +I+DNM +PAFVFDGRN+ +  +LREIGFIVY   G     WLKDM  VA
Sbjct:  411 KDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVY-SIGKPLDDWLKDMPAVA 480          
BLAST of EY702292 vs. ExPASy Swiss-Prot
Match: UGDH2_ARATH (Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidopsis thaliana GN=UGD2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.058e-45
Identity = 47/57 (82.46%), Postives = 51/57 (89.47%), Query Frame = 1
Query:    7 GRQARSSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMAKQVSVGWDAYEATK 177
            G +A+ SIYDPQVTE+QIQRDL+M KFDWDHPLHLQPMSPT  KQVSV WDAYEATK
Sbjct:  355 GDKAQISIYDPQVTEEQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVTWDAYEATK 411          

HSP 2 Score: 99.3673 bits (246), Expect = 8.058e-45
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 2
Query:  176 KDAHGVCILTEWDEFNTLDYHRIYDNMTEPAFVFDGRNVGDADELREIGFIVYCHWGSSSHPWLKDM 376
            KDAH VC+LTEWDEF +LDY +I+DNM +PAF+FDGRN+ + ++LREIGFIVY   G    PWLKDM
Sbjct:  411 KDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVY-SIGKPLDPWLKDM 476          
The following BLAST results are available for this feature:
BLAST of EY702292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
UGDH_SOYBN8.230e-4873.24UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV... [more]
UGDH1_ARATH2.794e-4587.27Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidop... [more]
UGDH2_ARATH8.058e-4582.46Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidop... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-D01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702292 ID=EY702292; Name=EY702292; organism=Citrus sinensis; type=EST; length=921bp
GCTTTTGGGAGACAAGCTCGGTCGAGCATATACGACCCACAGGTCACCGA
GGACCAGATCCAGAGGGACCTTACAATGAACAAGTTTGACTGGGACCATC
CTCTTCACCTCCAGCCAATGAGTCCCACCATGGCGAAACAAGTGAGCGTG
GGCTGGGATGCCTATGAAGCAACAAAAGGATGCCCATGGTGTCTGCATCT
TGACCGAATGGGATGAGTTCAACACTCTTGACTATCACAGGATATATGAC
AACATGACAGAACCCGCATTCGTGTTTGATGGCAGGAATGTTGGTGATGC
CGACGAGTTGAGGGAGATTGGTTTCATCGTGTACTGCCATTGGGGAAGCT
CGTCCCATCCTTGGTTGAAGGACATGACGGGTGTTGCATACAGGAGGGGG
GATGGGGCTGTTCGGGCAACCGAAGAGAGAAGAGGGAGGTGAGGAGGGGG
GGTGGTGAGTGAAGATGTTCTAAAGAGTACACAGCGGCCGCGGCGTTGCC
CCGCAGCTCTGGCGTGGTCAGGGTCCGCGATGCTTACTACTCTACTGTCT
CGCATCTACCCTTTTCTCTTTATCATTTCTAGTGCTGGGGTGCCTCCGGC
TATAACCAACACCCATACAATACACCCTACTCTTTAAAAGTCTAGAGGAC
GCGGCGTGCTGCGCGCGCGGGACGCCGCCGCCTGGGCGGCTAGGCCCCTA
ATGTTCCCATCTTGTTCGGCATTGCCATAGTGAAGGGGGGGGAGGAGCAT
GGTGGGGGTTGGTGTGTGGCGGTGTTGTGGGAGGAACGGCGTTTTGTGGA
GGGGTCCCTTCTGTTGGGGCTGTCGGCCGTCCCCTGTTTGCGCCCGCGTC
GCCGGTGTCGTGGGGGACTGATGGTGTAGATTGTTACGGCAGGGGGGGGG
GATAGGTGGGGGGGTGGGTGG
back to top