EY702206 | Citrus Genome Database

Overview


Name	EY702206
Unique Name	EY702206
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	862

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.529e-45
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 30.8018 bits (68), Expect = 1.529e-45
Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHFNSH-*KTXXXXXXXXXXXXRGKLP*PNQSLEQS-FINPDFLGKVFRWTQNMEK 616
            K LN GDVFVF  G+IHF  +  KT             G +   +     +  INPD L + F+   N+ K
Sbjct:  143 KVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVK 213

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.529e-45
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 30.8018 bits (68), Expect = 1.529e-45
Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHFNSH-*KTXXXXXXXXXXXXRGKLP*PNQSLEQS-FINPDFLGKVFRWTQNMEK 616
            K LN GDVFVF  G+IHF  +  KT             G +   +     +  INPD L + F+   N+ K
Sbjct:  143 KVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVK 213

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.993e-45
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 30.4166 bits (67), Expect = 1.993e-45
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LN GDVFVF  G+IHF
Sbjct:  143 KVLNPGDVFVFPIGMIHF 160

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.385e-45
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI D K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKV 145

HSP 2 Score: 30.8018 bits (68), Expect = 3.385e-45
Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHFNSH-*KTXXXXXXXXXXXXRGKLP*PNQSLEQS-FINPDFLGKVFRWTQNMEK 616
            K LN GDVFVF  G+IHF  +  KT             G +   +     +  INPD L + F+   N+ K
Sbjct:  144 KVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVK 214

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 9.763e-45
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+D K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   24 DPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKV 145

HSP 2 Score: 27.7202 bits (60), Expect = 9.763e-45
Identity = 23/71 (32.39%), Postives = 31/71 (43.66%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHFNSH-*KTXXXXXXXXXXXXRGKLP*PNQSLEQS-FINPDFLGKVFRWTQNMEK 616
            K L  GDVFVF  G+IHF  +  KT             G +   +     +  INPD L + F+   N+ K
Sbjct:  144 KVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVK 214

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.182e-43
Identity = 82/122 (67.21%), Postives = 96/122 (78.69%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 28.4906 bits (62), Expect = 5.182e-43
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K L+ GDVFVF  G+IHF
Sbjct:  143 KVLHPGDVFVFPIGMIHF 160

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.753e-43
Identity = 82/122 (67.21%), Postives = 96/122 (78.69%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 28.4906 bits (62), Expect = 6.753e-43
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K L+ GDVFVF  G+IHF
Sbjct:  143 KVLHPGDVFVFPIGMIHF 160

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.947e-42
Identity = 81/122 (66.39%), Postives = 96/122 (78.69%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVAI+D K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q    L AKV
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKV 144

HSP 2 Score: 28.4906 bits (62), Expect = 1.947e-42
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K L+ GDVFVF  G+IHF
Sbjct:  143 KVLHPGDVFVFPIGMIHF 160

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.618e-41
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 3

Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAK 413
            +DP  LQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EI +V +GTL VGF++S+Q    L AK
Sbjct:   25 SDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAK 146

HSP 2 Score: 31.9574 bits (71), Expect = 1.618e-41
Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LN GDVFVF  GLIHF
Sbjct:  146 KTLNVGDVFVFPEGLIHF 163

[Close]

BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.261e-41
Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 3

Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVA++D   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EI +V+EGTL VGFVTS+Q    L +KV
Sbjct:   26 DPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKV 146

HSP 2 Score: 27.335 bits (59), Expect = 5.261e-41
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  410 KSLNKGDVFVFHXGLIHF 463
            K L  GDVFVF  G+IHF
Sbjct:  145 KVLYPGDVFVFPIGMIHF 162

HSP 3 Score: 21.9422 bits (45), Expect = 5.261e-41
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  511 QFPGEITITEPVFGA 555
            Q PG ITI + VFG+
Sbjct:  180 QNPGTITIADAVFGS 194

The following BLAST results are available for this feature:

BLAST of EY702206 vs. ExPASy Swiss-Prot

BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84


Match Name	E-value	Identity	Description
GL117_ARATH	1.529e-45	68.85	Germin-like protein subfamily 1 member 17 OS=Arabi...	[more]
GL115_ARATH	1.529e-45	68.85	Germin-like protein subfamily 1 member 15 OS=Arabi...	[more]
GL119_ARATH	1.993e-45	68.85	Germin-like protein subfamily 1 member 19 OS=Arabi...	[more]
GL114_ARATH	3.385e-45	68.03	Germin-like protein subfamily 1 member 14 OS=Arabi...	[more]
GL113_ARATH	9.763e-45	68.03	Germin-like protein subfamily 1 member 13 OS=Arabi...	[more]
GL118_ARATH	5.182e-43	67.21	Germin-like protein subfamily 1 member 18 OS=Arabi...	[more]
GL120_ARATH	6.753e-43	67.21	Germin-like protein subfamily 1 member 20 OS=Arabi...	[more]
GL116_ARATH	1.947e-42	66.39	Germin-like protein subfamily 1 member 16 OS=Arabi...	[more]
GL18_ARATH	1.618e-41	61.48	Germin-like protein subfamily 1 member 8 OS=Arabid...	[more]
GL17_ARATH	5.261e-41	64.75	Germin-like protein subfamily 1 member 7 OS=Arabid...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG