EY688425

Overview
NameEY688425
Unique NameEY688425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_SOYBN (Phosphomannomutase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 1
Query:    1 NEIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFL 135
            NEIHF   KTYKGGNDHEI +SERTVGHTVTSP+DT+++CK+LFL
Sbjct:  201 NEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTVKQCKSLFL 245          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_SOLLC (Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1
Query:    1 NEIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLAK 141
            NEIHF   KTYKGGNDHEI +SERTVGHTVTSPE+T+++C  LFL K
Sbjct:  201 NEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEETLKQCSVLFLGK 247          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_TOBAC (Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 1
Query:    1 NEIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLAK 141
            NEIHF   KTYKGGNDHEI +SERTVGHTVTSPEDT+++C   FL K
Sbjct:  201 NEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEDTVKQCSEQFLGK 247          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_WHEAT (Phosphomannomutase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.144e-13
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 1
Query:    4 EIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLAK 141
            EIHF   KTYKGGNDHEI +S+RTVGHTVTSP DT+++CK++FL++
Sbjct:  204 EIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLSE 249          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_ORYSJ (Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.548e-13
Identity = 31/46 (67.39%), Postives = 41/46 (89.13%), Query Frame = 1
Query:    4 EIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLAK 141
            EIHF   KTYKGGND+EI +S+RT+GHTVTSP+DT E+C++LF++K
Sbjct:  203 EIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMSK 248          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_ORYSI (Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.548e-13
Identity = 31/46 (67.39%), Postives = 41/46 (89.13%), Query Frame = 1
Query:    4 EIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLAK 141
            EIHF   KTYKGGND+EI +S+RT+GHTVTSP+DT E+C++LF++K
Sbjct:  203 EIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMSK 248          
BLAST of EY688425 vs. ExPASy Swiss-Prot
Match: PMM_ARATH (Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.277e-12
Identity = 29/46 (63.04%), Postives = 40/46 (86.96%), Query Frame = 1
Query:    1 NEIHFSRGKTYKGGNDHEISQSERTVGHTVTSPEDTMEKCKALFLA 138
            +EIHF   KTY+GGND+EI +S +T+GH+VTSP+DT+ KCKALF++
Sbjct:  201 SEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKCKALFMS 246          
The following BLAST results are available for this feature:
BLAST of EY688425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PMM_SOYBN7.922e-1577.78Phosphomannomutase OS=Glycine max PE=2 SV=1[more]
PMM_SOLLC1.035e-1474.47Phosphomannomutase OS=Solanum lycopersicum PE=2 SV... [more]
PMM_TOBAC3.010e-1474.47Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1[more]
PMM_WHEAT1.144e-1369.57Phosphomannomutase OS=Triticum aestivum PE=2 SV=1[more]
PMM_ORYSJ2.548e-1367.39Phosphomannomutase OS=Oryza sativa subsp. japonica... [more]
PMM_ORYSI2.548e-1367.39Phosphomannomutase OS=Oryza sativa subsp. indica G... [more]
PMM_ARATH6.277e-1263.04Phosphomannomutase OS=Arabidopsis thaliana GN=PMM ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-070-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688425 ID=EY688425; Name=EY688425; organism=Citrus sinensis; type=EST; length=449bp
AATGAAATTCACTTTTCCCGTGGAAAAACTTACAAGGGAGGGAATGATCA
TGAAATTTCTCAATCCGAGCGAACAGTGGGTCACACAGTTACCAGCCCTG
AGGATACTATGGAAAAGTGTAAGGCTCTCTTCCTGGCTAAACCGTGAATT
TGGGAGAAGTTATAGTAAGTCTACAAACACGAGAGAATAATTCGTATTTC
TAATGCGAGCAATTCAATGTAATTTTATTTGATCAATTGAGAAAGGCATT
TGCCAATTGGATTCGTTGTATTTGATGTATGGATATGTTGCGGTTGTTTG
ATCGCGGGGTAAGTTCCTGCATGCTGGATGTAGGAGTGCAAAATCTCCGT
TAAAAACACGGTAGCGGCAGCAAAAACCTGCACATGAACACTATAATATA
TCGTTTCATAATCCAATAAACAAATTTCTTTTTAAAAAAAAAAAAAAAA
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