CX077154

Overview
NameCX077154
Unique NameCX077154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS92_ARATH (40S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.484e-58
Identity = 110/120 (91.67%), Postives = 119/120 (99.17%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEKNPRRIFEGEALLRRM+RYG L+E+QNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSF+VRV+SQKH++FSLTSPFGGGRPGRVKRRN
Sbjct:   59 RELLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRN 178
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS91_ARATH (40S ribosomal protein S9-1 OS=Arabidopsis thaliana GN=RPS9B PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 109/120 (90.83%), Postives = 119/120 (99.17%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            RDLLTLDEK+PRRIFEGEALLRRM+RYG L+ESQNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHH+RVLIRQRHIRVG+QLVNIPSF+VR+DSQKHI+F+LTSPFGGGRPGRVKRRN
Sbjct:   59 RDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRN 178
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_PODAN (40S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 92/119 (77.31%), Postives = 111/119 (93.28%), Query Frame = -3 
Query:  354 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRR 710
            R+LLTLDEK+P+R+FEG AL+RR+ R G L+ES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHARVLIRQRHIRVG+Q+VN+PSFVVR+DSQKHI+F+LTSPFGGGRPGRV+R+
Sbjct:   55 RELLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRK 173
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_RAT (40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQKHI+FSL SP+GGGRPGRVKR+N
Sbjct:   58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_PAPAN (40S ribosomal protein S9 OS=Papio anubis GN=RPS9 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQKHI+FSL SP+GGGRPGRVKR+N
Sbjct:   58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_MOUSE (40S ribosomal protein S9 OS=Mus musculus GN=Rps9 PE=2 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQKHI+FSL SP+GGGRPGRVKR+N
Sbjct:   58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_HUMAN (40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQKHI+FSL SP+GGGRPGRVKR+N
Sbjct:   58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_BOVIN (40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = -3 
Query:  351 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 710
            R+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQKHI+FSL SP+GGGRPGRVKR+N
Sbjct:   58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9_DROME (40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.365e-47
Identity = 92/121 (76.03%), Postives = 109/121 (90.08%), Query Frame = -3 
Query:  348 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 710
            R+LLTLDEK+ +R+F+G ALLRR+ R G L+ES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSFVVR+DSQKHI+FSL SPFGGGRPGRVKR+N+
Sbjct:   59 RELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179
[Close]
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS9B_SCHPO (40S ribosomal protein S9-B OS=Schizosaccharomyces pombe GN=rps9b PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46
Identity = 87/121 (71.90%), Postives = 110/121 (90.91%), Query Frame = -3 
Query:  348 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 710
            R+LLTLDEK+P+R+FEG A++RR+ R G L+ES+ KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+GGGRPGR KR+ +
Sbjct:   57 RELLTLDEKDPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRCKRKRL 177
The following BLAST results are available for this feature:
BLAST of CX077154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
RS92_ARATH2.484e-5891.6740S ribosomal protein S9-2 OS=Arabidopsis thaliana... [more]
RS91_ARATH9.440e-5890.8340S ribosomal protein S9-1 OS=Arabidopsis thaliana... [more]
RS9_PODAN1.046e-4877.3140S ribosomal protein S9 OS=Podospora anserina GN=... [more]
RS9_RAT1.511e-4775.8340S ribosomal protein S9 OS=Rattus norvegicus GN=R... [more]
RS9_PAPAN1.511e-4775.8340S ribosomal protein S9 OS=Papio anubis GN=RPS9 P... [more]
RS9_MOUSE1.511e-4775.8340S ribosomal protein S9 OS=Mus musculus GN=Rps9 P... [more]
RS9_HUMAN1.511e-4775.8340S ribosomal protein S9 OS=Homo sapiens GN=RPS9 P... [more]
RS9_BOVIN1.511e-4775.8340S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=... [more]
RS9_DROME3.365e-4776.0340S ribosomal protein S9 OS=Drosophila melanogaste... [more]
RS9B_SCHPO1.670e-4671.9040S ribosomal protein S9-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G09-M18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077154 ID=CX077154; Name=CX077154; organism=Citrus sinensis; type=EST; length=712bp
TTTTTTTTTTTTTTCCATTAAATCTAATATATATATATGCGCACAAAAAA
GCTAACTACACGGAGATTTAATTTAGGCATAAAAAAGCTTAAGGATCAAA
GAGTACATCCCAAAAAACAAAAACAATTCTCTCAATGAGTAGTCTGTAAA
GCACAAAGCAAGCAAAACCTCCTATTATAGGAAGAAAATTAGCAAAAACA
TAAAACTTAAGAGAAGATAAGTCGATTTGCAAAGTTCAGCCAGAGTTCCT
ACTGTAACCATAAAAAAACTATCTGCTCACACAAGGTAATTTATTCTTCA
TCCTCTTCATCTCCATCTCCACCTGCGGCCTTCTTGGCAGCAGCCTTAAT
GTTCCTTCTCTTCACTCTTCCGGGGCGCCCGCCTCCAAATGGACTTGTGA
GTGAGAATTCAATGTGCTTCTGGGAATCAACCCTCACTACAAATGAGGGA
ATGTTGACAAGCTGCCTTCCAACCCTAATGTGCCTCTGCCTGATGAGCAC
TCGAGCATGGTGAATTGACTTAGCCATGCCACTCTTGAACACAAGGGTCT
GAAGACGACGCTCAAGAAAGTTCTCCACAGTGAGGGCCAACACATAATCA
AGCTTGTTCTGGCTCTCTTCCAAGAAGCCATACCTGTGCATCCTCCTGAG
AAGGGCCTCACCCTCAAAAATACGTCGTGGGTTCTTCTCATCGAGAGTGA
GAAGATCCCTCG
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