CX077059

Overview
NameCX077059
Unique NameCX077059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.242e-59
Identity = 108/128 (84.38%), Postives = 122/128 (95.31%), Query Frame = -2
Query:  305 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATS 688
            DSEGWLRTGDLCYID+DGFIF+VDRLKELIKYKGYQV PAELEALLLTHP+I+DAAV+PFPDKE GQ+PMAYVVR+ GS LSE  +M+FVA+QVAPYKR+R+VAFV+SIPKNPSGKILRKDLIK+ATS
Sbjct:  415 DSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 542          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.983e-57
Identity = 102/128 (79.69%), Postives = 120/128 (93.75%), Query Frame = -2
Query:  299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 682
            +GWL+TGDLCYID+DG++F+VDRLKELIKYKGYQVPPAELEALLLTHP+++D AV+PFPD+E GQ+PMAY+VR+ GS LSE EVM+FVA+QVAPYK+VR+VAFV  IPKN SGKILRKDLIKLATSKL
Sbjct:  425 DGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAVIPFPDREVGQFPMAYIVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDLIKLATSKL 552          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.333e-56
Identity = 101/128 (78.91%), Postives = 118/128 (92.19%), Query Frame = -2
Query:  299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 682
            EGWL+TGDLCYID+DGF+F+VDRLKELIKYKGYQVPPAELEALL+THP I DAAV+PFPDKEAGQYPMAYVVR+  S LSE +V+DF+++QVAPYK++R+V+F+ SIPK  SGK LRKDLIKLATSKL
Sbjct:  423 EGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLATSKL 550          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54
Identity = 98/130 (75.38%), Postives = 117/130 (90.00%), Query Frame = -2
Query:  299 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 688
            DSEGWL+TGDLCYID DGF+F+VDRLKELIK  GYQV PAELEALLL HP+I+DAAV+P PD +AGQYPMAY+VR+ GS LSE+E+M FVA+QV+PYK++R+V F+ASIPKNPSGKILR++L KL TSKL
Sbjct:  436 DSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTSKL 565          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54
Identity = 99/129 (76.74%), Postives = 115/129 (89.15%), Query Frame = -2
Query:  299 SEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 685
            SEGWL+TGDLCYID+DGF+FIVDRLKELIKYKGYQVPPAELEALLL HP I DAAV+PFPDKEAGQ+PMAYV R+  S L E +V+DF+++QVAPYK++R+VAF+ SIPK PSGK LRKDLIK A SK+
Sbjct:  422 SEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLRKDLIKFAISKI 550          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54
Identity = 98/128 (76.56%), Postives = 115/128 (89.84%), Query Frame = -2
Query:  299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 682
            EGWL+ GDLCYID+DGF+F+VDRLKELIKYKGYQVPPAELEALL+ HP I DAAV+PFPD+EAGQYPMAYV R+  S LSE EV+DF++ QVAPYK++R+VAF++SIPK  SGK LRKDLIKL+TSKL
Sbjct:  425 EGWLKLGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLIAHPHILDAAVIPFPDREAGQYPMAYVARKPESNLSEKEVIDFISNQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLSTSKL 552          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 88/128 (68.75%), Postives = 117/128 (91.41%), Query Frame = -2
Query:  305 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATS 688
            DSEGWL+TGDLCY ++DGF++IVDRLKELIKYKGYQVPPAELE +L +HP I+DAAV+P+PD+EAG+ PMA++VR+ GS +++ +VMD+VA+QVAPYK+VRRVAFV +IPK+P+GKILR++L++ A S
Sbjct:  409 DSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILQSHPGIADAAVIPYPDEEAGELPMAFIVRQPGSNITKEQVMDYVAKQVAPYKKVRRVAFVTAIPKSPAGKILRRELVQQALS 536          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.234e-47
Identity = 83/126 (65.87%), Postives = 109/126 (86.51%), Query Frame = -2
Query:  311 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 688
            D EGWL+TGDLCY D + F++IVDRLKELIKYK YQVPP ELE +L ++P + DAAVVPFPD++AG+ PMA++VR+ GS L+E +++DFVA+QV PYK+VRRVAF+ +IPKNP+GKILR++L K+A
Sbjct:  429 DKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIA 554          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46
Identity = 86/131 (65.65%), Postives = 115/131 (87.79%), Query Frame = -2
Query:  299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA---TSKL 682
            +GWL+TGDLCY ++DG++++VDRLKELIKYKGYQVPPAELE +L + P+I+DAAVVP+PD+EAGQ PMA+VVR+ G+ L+E +VM+ VA+ VAPYK+VRRVAFV +IPK+P+GKILR++L+  A   TS+L
Sbjct:  468 DGWLKTGDLCYFNEDGYLYVVDRLKELIKYKGYQVPPAELEHILQSRPEIADAAVVPYPDEEAGQLPMAFVVRQPGAYLTEQQVMNCVAKHVAPYKKVRRVAFVNAIPKSPAGKILRRELVLQAMASTSRL 598          
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45
Identity = 85/123 (69.11%), Postives = 108/123 (87.80%), Query Frame = -2
Query:  320 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLI 688
            +SEGWL+TGDLCYID DGF+F+VDRLKELIKYK YQVPPAELE +L + P+I DAAV+P+P +EAGQ P+A VV++ GS+L+E EVM  VA+QVAPYK++R+V FV SIPK+PSGKILR++L+
Sbjct:  425 NSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSKLTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILRRELV 547          
The following BLAST results are available for this feature:
BLAST of CX077059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 337
Match NameE-valueIdentityDescription
4CLL5_ARATH1.242e-5984.384-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
4CLL4_ORYSJ1.983e-5779.694-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CLL4_ARATH8.333e-5678.914-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]
4CLL2_ARATH2.052e-5475.384-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
4CLL8_ARATH2.680e-5476.744-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
4CLL3_ARATH2.680e-5476.564-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
4CLL5_ORYSJ2.348e-5068.754-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
4CLL9_ARATH9.234e-4765.874-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
4CLL6_ORYSJ5.985e-4665.654-coumarate--CoA ligase-like 6 OS=Oryza sativa sub... [more]
4CLL7_ORYSJ6.618e-4569.114-coumarate--CoA ligase-like 7 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54A12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54A12-A24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077059 ID=CX077059; Name=CX077059; organism=Citrus sinensis; type=EST; length=689bp
TCAGCACAATTATATAGATTTCCAATTCTCAAACCCGAGCATGCCGGAGT
TCCAAATTGTCTAAAACATGATCCCTCCTACAAATGCACAAATGTGGCCC
CTGTTTATTCATATAGATCATTACAAGAAAAACAAAACATCTAAATTTCA
GTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAGTACAGCA
TAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAGAACCACT
ACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGCATTCAAA
GTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTTGCCTGAT
GGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCCTCTTGTA
TGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCTGATAATC
GACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCCAGCCTCC
TTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGATGAGTTAG
TAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTGTACTTGA
TCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATCATCAATG
TAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCA
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