DR908565

Overview
NameDR908565
Unique NameDR908565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3957 contig Csv1_Contig3957:2019..2620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.060e-66
Identity = 115/133 (86.47%), Postives = 127/133 (95.49%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMG YQP+HLSTR PARGQIHGFRMSLWYEHLGMLD++FL PES ECV+KVNQ+AE+YWDLYSSE+LEHDLPGHLLRYPIGV+ EGDVTELPGTEFFPDTKARVLG KSDY+PP+LTT
Sbjct:  676 NINQRSMDGARDSEIAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGAKSDYLPPILTT 808
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.029e-66
Identity = 111/133 (83.46%), Postives = 126/133 (94.74%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQPYHLSTR PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KVN++A++YWDLYSSESLEHDLPGHLLRYPIG++ EG++TELPG EFFPDTKAR+LG KSDYMPP+LTT
Sbjct:  678 NINQRSMDGARDSEIAMGGYQPYHLSTRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYMPPILTT 810
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.296e-64
Identity = 110/133 (82.71%), Postives = 125/133 (93.98%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQP+HLS R PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KVN+I+++YWD YSSESLEHDLPGHLLRYPIGV+ EGD+TELPG EFFPDTKAR+LGTKSDY+PP+LTT
Sbjct:  678 NINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYLPPILTT 810
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.211e-64
Identity = 110/133 (82.71%), Postives = 124/133 (93.23%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQP+HLS R PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KVN+I+++YWDLYSSESLEHDLPGHLLRYP+ V GEGDVTE PG EFFPDTKAR+LGTKSDY+PP+LTT
Sbjct:  678 NINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGTKSDYLPPILTT 810
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 4.925e-64
Identity = 111/133 (83.46%), Postives = 124/133 (93.23%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMG YQP+HL+TR PARGQIHGFRM+LWYEHLGMLD+TFL PES ECV KVN++A++YWDLYSSESLE DLPGHLLRYPIGV+ EGDVTELPG E FPDTKARVLGTKSDY+PP+LTT
Sbjct:  676 NINQRSMDGARDSEIAMGAYQPHHLATREPARGQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGTKSDYLPPILTT 808
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.069e-62
Identity = 107/133 (80.45%), Postives = 122/133 (91.73%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQPYHL+   PARGQ++GFRMSLWYEHLGML DTF +PES EC+ KVNQIA++YWDLYSSESLE DLPGHLLRYPIGV+ EG+VTELPG EFFPDTKAR+LG K+DY+PP+LTT
Sbjct:  677 NINQRSMDGARDSEIAMGGYQPYHLANTQPARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGAKADYLPPILTT 809
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.027e-61
Identity = 105/133 (78.95%), Postives = 121/133 (90.98%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQP+HLS R PARGQ+HGFRMSLWYEHLGMLD+TFL P S EC++KVN+IA++YWD YSSESLEHDLPGHLLRYPI V  EG++TELPG EFFPD+KAR+LG K DY+PP+LTT
Sbjct:  680 NINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGNKVDYLPPILTT 812
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.288e-61
Identity = 106/133 (79.70%), Postives = 123/133 (92.48%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GA+D+EIAMG YQP+HL+TR PARGQIHGFRMSLWYEHLGMLDDT   PES +CV+KVN +A++YWDLYSSE+LE+DLPGHLLRYPI V+ EG+VTELPGTEFFPDTKARVLG KSD++PP+LTT
Sbjct:  676 NINQRSMDGAKDSEIAMGAYQPHHLATREPARGQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGAKSDFLPPILTT 808
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 5.096e-61
Identity = 105/133 (78.95%), Postives = 122/133 (91.73%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMGGYQPYHL+TR PARGQIHGFRM+LWYEHLGMLDD F +PES ECV+KVN+IAE+YWD+YSS+ L+ DLPGHLL YPIGV+ +G VTELPG E+FPDT+ARVLG KSDYMPP+LT+
Sbjct:  680 NINQRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGAKSDYMPPILTS 812
[Close]
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.483e-60
Identity = 105/133 (78.95%), Postives = 120/133 (90.23%), Query Frame = 2 
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+GARD+EIAMG YQPYHL+TR PARGQIHGFRMSLWYEHLGML+D F +PES ECV+KVN++AE+YWDLYSS+ LE DLPGHLL YPIGV+ +G VTELPG E FPDT+ARVLG KSDY+PP+LTT
Sbjct:  680 NINQRSMDGARDSEIAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGNKSDYLPPILTT 812
The following BLAST results are available for this feature:
BLAST of DR908565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDA1_RICCO1.060e-6686.47Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA2_ARATH4.029e-6683.46Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_ARATH1.296e-6482.71Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_BRAOC2.211e-6482.71Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA1_TOBAC4.925e-6483.46Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA1_VIGUN2.069e-6280.45Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA2_BRAOC1.027e-6178.95Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_PIMBR2.288e-6179.70Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA1_ORYSJ5.096e-6178.95Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA1_MAIZE1.483e-6078.95Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16693 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-36_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908565 ID=DR908565; Name=DR908565; organism=Citrus sinensis; type=EST; length=602bp
CAACATCAACCAGCGATCAATGGAGGGTGCTAGGGACACTGAGATAGCCA
TGGGAGGCTACCAACCATATCATTTGTCAACCAGGGTGCCAGCACGAGGC
CAGATACACGGCTTCCGTATGTCACTATGGTACGAGCACCTAGGCATGCT
CGATGACACCTTCCTCCAGCCAGAAAGTAGCGAATGTGTTAAGAAGGTTA
ACCAGATTGCCGAACGGTATTGGGACCTGTACTCCAGTGAGTCTCTTGAG
CATGACTTGCCCGGTCACTTGCTCCGCTACCCTATTGGTGTTTCTGGTGA
AGGAGATGTCACGGAGTTGCCAGGAACTGAGTTCTTCCCCGACACCAAGG
CTCGTGTTCTCGGTACCAAATCAGATTATATGCCCCCAGTCCTGACCACC
TGATGCTCTCCAGAGGGTGCCAAAAATAATTTCGTAGTTGCGAACTACCG
GTTATGGTAGTATAGCAAATAATAAATGATGTGTATTAAAACCAACAGGT
GTGGTATTGTTTTTCTGCTTTGGTTCAGAGATGTGGTGTGATTTGGTGAT
ATACTGACGGGAAACTTATTAAGTCTGTTTATTTGTGCATTAAAAAAAAA
AA
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