DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8201 contig Csv1_Contig8201:384..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.070e-53
Identity = 106/141 (75.18%), Postives = 111/141 (78.72%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKC 424
            HIISGPGIVD                AEMSSAGNLA G YTAAAVKIAEDHSDFVIGFISVNPASWP AP NP+ I ATPGVQ+VKGGD LGQ YNTP +VI DRGSDIIIVGRGIIKAA+P  AAREYRLQGW+AYL  C
Sbjct:  320 HIISGPGIVDGLKLKGLSRGRGLLLLAEMSSAGNLATGAYTAAAVKIAEDHSDFVIGFISVNPASWPNAPGNPSLIHATPGVQLVKGGDALGQLYNTPSAVIADRGSDIIIVGRGIIKAANPIEAAREYRLQGWDAYLVNC 460          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.212e-50
Identity = 101/142 (71.13%), Postives = 109/142 (76.76%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKCS 427
            H+ISGPGIVD                AEMSSAGNLA GDYTAAAVKIA+ HSDFV+GFISVNPASW    V P+ I ATPGVQMVKGGD LGQQYNTP+SVI +RGSDIIIVGRGIIKA +PA  A EYR+QGW AYL KCS
Sbjct:  334 HVISGPGIVDGLKLKGMPRGRGLLLLAEMSSAGNLATGDYTAAAVKIADAHSDFVMGFISVNPASWKCGYVYPSMIHATPGVQMVKGGDALGQQYNTPHSVITERGSDIIIVGRGIIKAENPAETAHEYRVQGWNAYLEKCS 475          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.980e-33
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            H++ G G+V                 AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  343 HVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSR 477          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.042e-32
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            H++ G G+V                 AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  343 HVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADCLEAAEMYRKAAWEAYLSR 477          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.754e-31
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            H + G G+V                 AEMSSAG LA G YT AAV++AE+HS+FVIGFIS +  S     + P F+  TPGVQ+  GGD+LGQQY++P  VI  RGSDIIIVGRGII +A+   AA+ YR   WEAYL++
Sbjct:  343 HAVPGSGVVKGLEEVGLPLHRACLLVAEMSSAGTLATGSYTEAAVQMAEEHSEFVIGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYHSPQEVIGKRGSDIIIVGRGIIASANQLEAAKMYRKAAWEAYLSR 477          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 1.664e-30
Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            H++ G G+V                 AEMSSAG+LA G+YT AAV +AE+H +FVIGFIS +  S     + P F+  TPGVQ+  GGD LGQQYN+P  VI  RGSD+IIVGRGI+ AA+   AA  YR   WEAYL++
Sbjct:  343 HVVPGSGVVKGLQEVGLPLHRACLLIAEMSSAGSLATGNYTKAAVGMAEEHCEFVIGFISGSRVS-----MKPEFLHLTPGVQLETGGDHLGQQYNSPQEVIGKRGSDVIIVGRGILAAANRLEAAEMYRKAAWEAYLSR 477          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PENCH (Orotidine 5'-phosphate decarboxylase OS=Penicillium chrysogenum GN=pyrG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23
Identity = 59/117 (50.43%), Postives = 76/117 (64.96%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFIS---VNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S   +       AP +  F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  159 AEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPASEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 274          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PENCA (Orotidine 5'-phosphate decarboxylase OS=Penicillium camembertii GN=pyrG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.360e-23
Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGSYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAI-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PENNA (Orotidine 5'-phosphate decarboxylase OS=Penicillium nalgiovense GN=pyrG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.486e-23
Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CLAFU (Orotidine 5'-phosphate decarboxylase OS=Cladosporium fulvum GN=PYR1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.486e-23
Identity = 58/118 (49.15%), Postives = 75/118 (63.56%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G+YT+A+V  A  +  FV+GF+S    +   + V  A    F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGEYTSASVDYARKYPSFVLGFVSTRALTEVSSTVTAADNEDFVVFTTGVNLSSKGDKLGQQYQTPQSAI-GRGADFIIAGRGIYTAPDPVEAAKQYQQQGWEAYLAR 272          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYR5_TOBAC4.070e-5375.18Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_ARATH4.212e-5071.13Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_HUMAN7.980e-3352.86Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_PONAB1.042e-3252.86Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_BOVIN9.754e-3151.43Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_MOUSE1.664e-3050.71Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYRF_PENCH1.508e-2350.43Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENCA3.360e-2350.85Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENNA7.486e-2350.00Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_CLAFU7.486e-2349.15Orotidine 5'-phosphate decarboxylase OS=Cladospori... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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