DR908554

Overview
NameDR908554
Unique NameDR908554
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.572e-72
Identity = 115/180 (63.89%), Postives = 145/180 (80.56%), Query Frame = 1
Query:    1 KSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLLDSFKFHDGDKLGVQFIK 540
            +SAA+LSP+AYLS+M T +G IAAK+F+ E T++LG  EFNPK   V DF+K++C    ++CYDL++ +TG+NCCLN+ST+DLFL NEPQSTSTKNM+HLAQTVRD  + K+NYG  D N+ HYG+  PP YNIS IPH+LPLF SYGG D+LADV DVE LLD FK+HD DK+ VQF+K
Sbjct:  210 RSAAMLSPVAYLSHMTTVIGDIAAKTFLAEATSILGWPEFNPKSGLVGDFIKAICLKAGIDCYDLVSVITGKNCCLNASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNIKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVK 389          

HSP 2 Score: 45.4394 bits (106), Expect = 1.572e-72
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 3
Query:  537 QSYGHADFIMGINAKDIVYNQVVAFF 614
            + Y HADFIMG+ AKD+VYNQV  FF
Sbjct:  389 KDYAHADFIMGVTAKDVVYNQVATFF 414          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.668e-32
Identity = 65/163 (39.88%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    1 KSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            ++AALL PI+YL ++   L        + ++   LGL + N +   +   + SLC   + +C D LTS+TG NCC N+S ++ +L  EP  +S KN+ HL Q +R G  A+++YG    NL  YG  +PP + +S+IP  LP+++ YGG D LADV+DVE+ L
Sbjct:  186 EAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLCEGHM-DCTDFLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGY-FKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTL 346          

HSP 2 Score: 34.6538 bits (78), Expect = 8.668e-32
Identity = 12/26 (46.15%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  537 QSYGHADFIMGINAKDIVYNQVVAFF 614
            + YGH DF++G +AK+ VY  ++ FF
Sbjct:  359 EDYGHIDFVLGSSAKEDVYKHMIQFF 384          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPG_CANFA (Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.240e-17
Identity = 54/167 (32.34%), Postives = 90/167 (53.89%), Query Frame = 1
Query:    1 KSAALLSPIAYLSYMRTALG-VIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVN--CYDLLTSLTGRNCC-LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            K+   L+P+A + Y  T L  ++   SF+ ++  + G   F P           +C+   V+  C + L  + G +   LN S +D++L + P  TS +N++H +Q V+ G    F++G P  N+MHY +  PP YN++++   +P+ V  GGND LAD  DV+ LL
Sbjct:  193 KTFYALAPVATVKYTETLLNKLMLVPSFLFKL--IFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVDLLL 355          

HSP 2 Score: 27.7202 bits (60), Expect = 2.240e-17
Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  543 YGHADFIMGINAKDIVYNQVVA 608
            Y H DFI  ++A   VYN++V+
Sbjct:  370 YNHLDFIWAMDAPQAVYNEIVS 391          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 1
Query:   16 LSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVN--CYDLLTSLTGRNCC-LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            L+P+A + Y R+ +  +   S    +  L G   F+            +C   + +  C + L SL+G +   LN S +D++L   P  TS +NM+H AQ V  G +  F++G PD N+MH+ +  PP+YNIS +   +P  +  GG D +AD  D +NLL
Sbjct:  197 LAPVATVKYTRSPMKKLTTLSRKA-VKVLFGDKMFSTHTWFEQFIATKVCNRKLFHQLCSNFLFSLSGFDPQNLNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKM--RVPTAMWSGGQDVVADAKDTKNLL 354          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.374e-16
Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 1
Query:   16 LSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVN--CYDLLTSLTGRNCC-LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            L+P+  + Y ++ +  +   S    +  L G   F+P           +C   +    C + L +L+G +   LN S +D++L + P  TS +NM+H AQ V  G +  F++G  D N+MH+ +  PP+YNI+ +  ++P  +  GG D +AD  DVENLL
Sbjct:  198 LAPVVTVKYTQSPMKKLTTLSR-RVVKVLFGDKMFHPHTLFDQFIATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDWGNSDQNMMHFHQLTPPLYNITKM--EVPTAIWNGGQDIVADPKDVENLL 355          

HSP 2 Score: 22.3274 bits (46), Expect = 2.374e-16
Identity = 7/21 (33.33%), Postives = 12/21 (57.14%), Query Frame = 3
Query:  543 YGHADFIMGINAKDIVYNQVV 605
            Y H DF +G +A   +Y  ++
Sbjct:  370 YNHVDFYLGEDAPQEIYQDLI 390          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPG_RAT (Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.145e-15
Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = 1
Query:    1 KSAALLSPIAYLSYMRTALGVIA-AKSFVGEITTLLGLAEFNPKGKPVADFLKS-LCTNPVVNCYDLLTSLTGRNCC------LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            K+   L+P+A + Y ++ L  I+   +F+ ++  + G   F P      DFL + +C+  V+   DLL S T    C      LN S  D++L + P  TS ++ +H AQ VR G    FN+G P  N++HY +  PP Y++S +   +P+ V  GGND LAD  DV  LL
Sbjct:  192 KTFYALAPVATVKYTQSPLKKISFIPTFLFKL--MFGKKMFLPHTY-FDDFLGTEVCSREVL---DLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPAGTSVQDFLHWAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLL 354          

HSP 2 Score: 26.1794 bits (56), Expect = 1.145e-15
Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  540 SYGHADFIMGINAKDIVYNQVVA 608
            +Y H DFI  ++A   VYN++++
Sbjct:  368 AYNHLDFIWAMDAPQEVYNEMIS 390          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPG_BOVIN (Gastric triacylglycerol lipase OS=Bos taurus GN=LIPF PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.242e-15
Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   16 LSPIAYLSYMRTALGVIAA-KSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVN--CYDLLTSLTG-RNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            L+P+A + Y ++    +A    F+ +I  + G   F P           +C+   ++  C + L ++TG  N   N S +D+++ + P  TS +N +H  Q V+ G    F++G P  NLMHY +  PPIYN++ +  ++P+ V    ND LAD  DV+ LL
Sbjct:  197 LAPVATVKYTKSLFNKLALIPHFLFKI--IFGDKMFYPHTFLEQFLGVEMCSRETLDVLCKNALFAITGVDNKNFNMSRLDVYIAHNPAGTSVQNTLHWRQAVKSGKFQAFDWGAPYQNLMHYHQPTPPIYNLTAM--NVPIAVWSADNDLLADPQDVDFLL 354          

HSP 2 Score: 27.335 bits (59), Expect = 4.242e-15
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  540 SYGHADFIMGINAKDIVYNQVVA 608
            +Y H DFI  ++A   VYN++V+
Sbjct:  368 NYNHLDFIWAMDAPQEVYNEIVS 390          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LICH_RAT (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus GN=Lipa PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.209e-14
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1
Query:  100 LLGLAEFNPKGKPVADFLKSLCTNPVV-----NCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            L G  +F P+   V      +CT+ ++     N + L+     +N  LN S VD++  + P  TS +NMVH  Q V+   +  F++G  D N  HY +  PP+Y+I ++   LP  +  GG D LAD SD+  LL
Sbjct:  225 LFGQKQFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKN--LNMSRVDVYTTHCPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDM--QLPTALWSGGKDWLADTSDINILL 355          

HSP 2 Score: 25.0238 bits (53), Expect = 1.209e-14
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  543 YGHADFIMGINAKDIVYNQVVA 608
            + H DFI G++A   +YN+VV+
Sbjct:  370 WDHLDFIWGLDAPWRLYNEVVS 391          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPG_HUMAN (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.209e-14
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 1
Query:  145 DFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            + L  LC+N +     ++     +N   N+S +D++L + P  TS +NM H  Q V+ G    +++G P  N MHY + +PP YN++ +  ++P+ V  GG D LAD  DV  LL
Sbjct:  249 EMLNLLCSNALF----IICGFDSKN--FNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAM--NVPIAVWNGGKDLLADPQDVGLLL 355          

HSP 2 Score: 26.5646 bits (57), Expect = 1.209e-14
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 3
Query:  543 YGHADFIMGINAKDIVYNQVVAFFN 617
            Y H DFI  ++A   VYN +V+  +
Sbjct:  370 YNHLDFIWAMDAPQEVYNDIVSMIS 394          
BLAST of DR908554 vs. ExPASy Swiss-Prot
Match: LIPG_MOUSE (Gastric triacylglycerol lipase OS=Mus musculus GN=Lipf PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.557e-14
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  226 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVSDVENLL 489
            LN S  D++L + P  TST+++ H AQ  + G +  +N+G P  N++HY +  PP Y++S +   +P+ V  GG+D LAD  DV  LL
Sbjct:  269 LNVSRFDVYLGHNPAGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVSAM--TVPIAVWNGGHDILADPQDVAMLL 354          

HSP 2 Score: 26.5646 bits (57), Expect = 7.557e-14
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  543 YGHADFIMGINAKDIVYNQVV 605
            Y H DFI  ++A   VYN++V
Sbjct:  369 YNHLDFIWAMDAPQEVYNEIV 389          
The following BLAST results are available for this feature:
BLAST of DR908554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LIP2_ARATH1.572e-7263.89Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIP1_ARATH8.668e-3239.88Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIPG_CANFA2.240e-1732.34Gastric triacylglycerol lipase OS=Canis familiaris... [more]
LIPK_MOUSE1.047e-1632.92Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LIPK_HUMAN2.374e-1631.68Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPG_RAT1.145e-1535.09Gastric triacylglycerol lipase OS=Rattus norvegicu... [more]
LIPG_BOVIN4.242e-1531.48Gastric triacylglycerol lipase OS=Bos taurus GN=LI... [more]
LICH_RAT1.209e-1434.07Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPG_HUMAN1.209e-1434.78Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
LIPG_MOUSE7.557e-1439.77Gastric triacylglycerol lipase OS=Mus musculus GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16682 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-03_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908554 ID=DR908554; Name=DR908554; organism=Citrus sinensis; type=EST; length=617bp
AAATCAGCTGCCTTGTTGAGCCCCATTGCTTACTTGAGCTACATGAGAAC
TGCTCTTGGCGTTATTGCTGCCAAATCTTTTGTTGGGGAGATTACTACAC
TGTTAGGTTTGGCTGAGTTCAATCCAAAAGGGAAACCCGTAGCTGACTTT
CTCAAGAGCCTTTGCACTAATCCTGTGGTTAACTGCTACGATTTATTAAC
ATCACTTACTGGGAGAAATTGCTGTCTAAATTCTTCCACAGTCGATCTCT
TCTTGAGAAATGAACCTCAATCAACATCAACCAAAAACATGGTGCACTTG
GCTCAAACTGTTCGAGATGGAGTAATTGCAAAGTTCAACTATGGGAGACC
TGACTACAATCTAATGCATTACGGGGAATTTAGACCACCCATATACAATA
TCTCCAACATTCCCCATGACCTGCCTCTCTTCGTCAGCTATGGAGGCAAC
GATGCACTGGCTGATGTTAGCGATGTCGAGAATTTGCTCGACAGTTTCAA
GTTTCACGACGGGGACAAGCTTGGTGTTCAATTCATCAAAGCTATGGACA
TGCAGATTTCATCATGGGCATCAATGCCAAGGATATTGTGTATAACCAAG
TTGTAGCTTTCTTTAAC
back to top