DR908542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.112e-74 Identity = 130/146 (89.04%), Postives = 134/146 (91.78%), Query Frame = 1 Query: 43 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 480 MTLGSGGSSVVVPRNFR RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV+PKKFGLL NWQREYTMEDIL QLKKEM+ HNRKLVQPPEGT F Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 2.740e-73 Identity = 130/146 (89.04%), Postives = 136/146 (93.15%), Query Frame = 1 Query: 43 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 480 MTLGSG SSVVVPRNFR RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV+ KKFG+L NWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F Sbjct: 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.330e-56 Identity = 101/141 (71.63%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 49 LGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 + S + VVVPRNFR RGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +EG+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVVEP F +L NW+REYTMEDIL +LKKEM HNRKL QPPEG Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEG 141
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.279e-54 Identity = 99/141 (70.21%), Postives = 112/141 (79.43%), Query Frame = 1 Query: 49 LGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 +GS VVVPRNFR RGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +EG+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV+P F +L NW+RE+TMED+L QLKKEM + NRKL QP EG Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLEG 141
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40 Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 76 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 480 +PRNF GEK GDGT+SYG++ DDI + SW GTIIGP NT + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK +L NW + +++IL++L++EM++ N+KLVQPPEG F Sbjct: 4 IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSSSSNKKLVQPPEGANF 138
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: MMS2_SCHPO (Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe GN=spm2 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 1 Query: 76 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 480 VPRNF+ +GEKG+G+ + SYG+ + DDI + W TI+GP ++VHE RIY LK+ CD +YP+ PP V F SRIN+ V+ ETG V P K L +W+REY+ME +L LKKEMA+ NRKL QPPEG+ F Sbjct: 4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGSTF 138
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UB2V1_HUMAN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36 Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 61 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 GS V VPRNFR G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UB2V1_BOVIN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36 Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 61 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 GS V VPRNFR G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UB2V1_MOUSE (Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 68/137 (49.64%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 61 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 GS V VPRNFR G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV+P+ +L WQ ++++ IL +L++ M + N KL QPPEG Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEG 142
BLAST of DR908542 vs. ExPASy Swiss-Prot
Match: UB2V1_PONAB (Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 61 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 471 GS V VPRNFR G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY LK+ C PE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKCPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142 The following BLAST results are available for this feature:
BLAST of DR908542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908542 ID=DR908542; Name=DR908542; organism=Citrus sinensis; type=EST; length=619bpback to top |