DR908502

Overview
NameDR908502
Unique NameDR908502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6241 contig Csv1_Contig6241:58..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_ARATH (Probable phosphoribosylformylglycinamidine synthase, chloroplastic OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.209e-61
Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 3
Query:    3 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 347
            KGMEGSTLGVWAAHGEGRAYFPD+GVLD +LHS LAP+RYCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERCFLMWQ+PWYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1269 KGMEGSTLGVWAAHGEGRAYFPDEGVLDHMLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCFLMWQFPWYPTSWDVEKAGPSPWLKMFQNARDW 1383          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_DICDI (Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.025e-35
Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 3
Query:    3 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKG---PSPWLKMFQNAREWC 350
            KGMEGS LGVW+ HGEGR +  D  +++ I  ++L+P+RY DDDG  TE YPFN +G+  G A++CS DGRHLA+MPHPER FL WQ+P+ P+N   +  G   PSPW+K+FQNA+ +C
Sbjct: 1233 KGMEGSVLGVWSQHGEGRFWSEDQSIVNDIKANNLSPIRYVDDDGEITESYPFNPSGTQEGFASLCSKDGRHLAIMPHPERSFLSWQWPFMPENIKQNVGGLDQPSPWIKIFQNAKSFC 1351          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_MOUSE (Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.189e-31
Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 3
Query:    3 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS*D 359
            +GMEGS L VW+AHGEG   F    +  +I    L P+ + DDDGNPTE YP N NGSP G+A ICS DGRHLA+MPHPER   +WQ+ W P  ++V     SPWL++F NAR W   D
Sbjct: 1219 RGMEGSVLPVWSAHGEGYMAFSSPELQAKIEAKGLVPLHWADDDGNPTEQYPLNPNGSPGGIAGICSQDGRHLALMPHPERAVRLWQWAWRPSPFDV--LPTSPWLQLFINARNWTQED 1335          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_HUMAN (Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.007e-30
Identity = 64/115 (55.65%), Postives = 76/115 (66.09%), Query Frame = 3
Query:    3 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 347
            +GMEG+ L VW+AHGEG   F    +  +I    LAP+ + DDDGNPTE YP N NGSP GVA ICS DGRHLA+MPHPER    WQ+ W P  +  D    SPWL++F NAR W
Sbjct: 1220 RGMEGAVLPVWSAHGEGYVAFSSPELQAQIEARGLAPLHWADDDGNPTEQYPLNPNGSPGGVAGICSCDGRHLAVMPHPERAVRPWQWAWRPPPF--DTLTTSPWLQLFINARNW 1332          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_DROME (Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 3
Query:    9 MEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVD-KKGPSPWLKMFQNAREWC 350
            M+   LG W AHGEGR  F D+ ++  +    L  ++Y DD G PTE+YP N NGSP G+A +CS DGRHLA+MPHPERC  M+Q+P+ P ++ V   +  SPW  MF NA  WC
Sbjct: 1235 MKDLVLGCWVAHGEGRFAFRDEKLISHLQSEQLVTLQYVDDVGKPTELYPLNPNGSPQGIAGLCSSDGRHLALMPHPERCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYNWC 1349          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_METFK (Phosphoribosylformylglycinamidine synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=purL1 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.173e-25
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 3
Query:    6 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 347
            GM GS + +  AHGEG A F D     R   + L  +RY D+ G PTEVYPFN NGSP G+  + + DGR   MMPHPER F   Q+ W+P  W  D     PW++MF+NAR++
Sbjct: 1182 GMAGSRMPIAVAHGEGYAEFADAAAQQRAQDARLVTLRYVDNSGLPTEVYPFNPNGSPQGITGLTTADGRFSIMMPHPERVFRTVQHSWHPDGWGED----GPWIRMFRNARKF 1291          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_RALSO (Phosphoribosylformylglycinamidine synthase OS=Ralstonia solanacearum GN=purL PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.352e-24
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 3
Query:    6 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 344
            GMEGS + +  AHGEG A F   G + ++       +RY D+ G  T+ YP N NGSP G+A++ + DGR   +MPHPER F   Q  W+PK+W     G SPW++MF+NAR+
Sbjct: 1258 GMEGSRIPIVVAHGEGYADFSQQGDIGKVA----VGLRYVDNRGEVTQTYPLNPNGSPQGIASVTTHDGRFTVLMPHPERVFRAVQMSWHPKDWAAAGDGSSPWMRMFRNARK 1366          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_PSEHT (Phosphoribosylformylglycinamidine synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=purL PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.530e-23
Identity = 52/113 (46.02%), Postives = 66/113 (58.41%), Query Frame = 3
Query:    6 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 344
            GM GS + +  +HGEG A F +D  +   L S    V++ D+ GNPT  YP N NGSP G+  I S DGR   MMPHPER F      W+P  W  D    SPW++MF+NAR+
Sbjct: 1185 GMAGSRMPIAVSHGEGHAEFANDNAVKAALDSGTVAVKFVDNYGNPTTQYPANPNGSPEGITGITSTDGRATVMMPHPERVFRAVANSWHPDEWRED----SPWMRMFRNARK 1293          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_PSEA6 (Phosphoribosylformylglycinamidine synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=purL PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.917e-23
Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 3
Query:    3 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAR 341
            KGM+GS + +  +HGEGRA F     L+  L S+   ++Y D+ G  TE YP N NGSP G++ + S DGR   MMPHPER F      W+P +W  D    SPW++MF+NAR
Sbjct: 1183 KGMQGSKMPIAVSHGEGRAEFAQTTGLEAALDSNTIALQYVDNYGKVTEQYPANPNGSPAGISGLTSKDGRATIMMPHPERVFRTVANSWHPDDWQED----SPWMRMFRNAR 1291          
BLAST of DR908502 vs. ExPASy Swiss-Prot
Match: PUR4_CAEEL (Probable phosphoribosylformylglycinamidine synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.009e-22
Identity = 59/130 (45.38%), Postives = 75/130 (57.69%), Query Frame = 3
Query:    6 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDD-------DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY------PWYPKNWNVDKK--GPSPWLKMFQNAREWC 350
            GME S LG+W++HGEGR  + +      +  +    +R+CDD        G+    YP+N NGS   VAAICS DGRHLAMMPH +R FL WQ+      PW   N   D+K    SPW+KMF+NA  WC
Sbjct: 1216 GMENSVLGLWSSHGEGRFTYRNLQNFQNLKTNGQVCIRFCDDRGMTGADHGSVKLPYPWNPNGSIDDVAAICSRDGRHLAMMPHADRSFLTWQWAESSEVPW---NARFDQKTVALSPWIKMFRNAYNWC 1342          
The following BLAST results are available for this feature:
BLAST of DR908502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PUR4_ARATH3.209e-6186.09Probable phosphoribosylformylglycinamidine synthas... [more]
PUR4_DICDI3.025e-3555.46Phosphoribosylformylglycinamidine synthase OS=Dict... [more]
PUR4_MOUSE1.189e-3153.78Phosphoribosylformylglycinamidine synthase OS=Mus ... [more]
PUR4_HUMAN1.007e-3055.65Phosphoribosylformylglycinamidine synthase OS=Homo... [more]
PUR4_DROME2.930e-3050.43Phosphoribosylformylglycinamidine synthase OS=Dros... [more]
PUR4_METFK2.173e-2547.37Phosphoribosylformylglycinamidine synthase OS=Meth... [more]
PUR4_RALSO5.352e-2445.13Phosphoribosylformylglycinamidine synthase OS=Rals... [more]
PUR4_PSEHT4.530e-2346.02Phosphoribosylformylglycinamidine synthase OS=Pseu... [more]
PUR4_PSEA65.917e-2346.02Phosphoribosylformylglycinamidine synthase OS=Pseu... [more]
PUR4_CAEEL1.009e-2245.38Probable phosphoribosylformylglycinamidine synthas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16630 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-29_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908502 ID=DR908502; Name=DR908502; organism=Citrus sinensis; type=EST; length=627bp
TGAAAGGAATGGAAGGCAGCACATTAGGTGTCTGGGCTGCCCATGGTGAG
GGTAGAGCGTATTTCCCTGATGATGGTGTTCTTGATCGTATCCTTCATTC
ACATTTGGCTCCAGTAAGATATTGTGATGATGATGGAAATCCTACAGAAG
TTTACCCTTTTAATGTGAATGGCTCTCCCTTAGGAGTGGCAGCAATTTGT
TCACCCGATGGAAGACATCTTGCTATGATGCCTCATCCAGAGCGTTGCTT
CTTAATGTGGCAGTACCCGTGGTACCCCAAGAACTGGAATGTGGACAAAA
AGGGCCCTAGCCCATGGTTAAAGATGTTCCAAAATGCCAGAGAATGGTGT
TCTTGAGATGGGTTAGTAACTCCCCTTTTCCATTTTCCCTTCAGGAAGGT
TGCTGCCTCTAATTGCTTGCTGATTCATTTCTGTGCTGATGTATGGTATG
TTTGATGCCGGGAAAGCCAGGGCTCTGATTGCTACATAAAAAATCTGCAG
AGATTTTGAAGTGAGTTGTATTTGGCTTTCTGATTTAGGCCAATTTTAGA
AGACATCCAAAGTGTTAATTTCTTTTGATAATTTTATTTGCAAGAATTAC
GTCAACGATAACTGAAAATTGACATAT
back to top