DR908498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_SOLTU (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.449e-77 Identity = 140/176 (79.55%), Postives = 156/176 (88.64%), Query Frame = 2 Query: 62 PESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLK 589 PES IESAKFVYLMGADDV+L+KLP+DAFVVYQGHHGDRGVYRANVILPASAF+EKEG YENTEGC Q TLPAVPTVGDARDDWKI+RALSEVAG+ LPYD++G IRSRI+TVAPNLL VDER+PAT SL+PE+ ++ TPF AVENFYMTD+ITRASK MAQCSA+L K Sbjct: 563 PESDKCIESAKFVYLMGADDVNLDKLPDDAFVVYQGHHGDRGVYRANVILPASAFTEKEGIYENTEGCAQITLPAVPTVGDARDDWKIVRALSEVAGVGLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTSLRPEVSQKVSATPFTPAVENFYMTDAITRASKIMAQCSALLKK 738
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_ARATH (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1 SV=2) HSP 1 Score: 287.73 bits (735), Expect = 3.228e-77 Identity = 136/176 (77.27%), Postives = 160/176 (90.91%), Query Frame = 2 Query: 65 ESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLKK 592 +S+ ++ESAKFVYLMGADDV+++K+P DAFVVYQGHHGD+ VYRANVILPASAF+EKEGTYENTEG TQQT+PAVPTVGDARDDWKI+RALSEV+G++LPY++I G+RSRI++VAPNL+H DEREPA GPSLKPE K M TPF + VENFYMT+SITRASK MAQCSA+LLKK Sbjct: 570 QSAKALESAKFVYLMGADDVNVDKIPKDAFVVYQGHHGDKAVYRANVILPASAFTEKEGTYENTEGFTQQTVPAVPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIKSVAPNLVHTDEREPAAFGPSLKPECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAVLLKK 745
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_NEUCR (NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-78 PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 3.857e-38 Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 2 Query: 62 PESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLKPEIKSE-----MDLTPFGSAVENFYMTDSITRASKTMAQCSA 577 P + + KFV+L+GAD+ + +P DAF+VYQGHHGDRG A+++LP +A++EK GTY NTEG Q T A G AR DWKI+RA+SE G+RLPYD + +R R+ ++P L D EP +L K ++ + P +ENFY TD+I+R+S TMA+CSA Sbjct: 539 PSAEIAQTKPKFVWLLGADEFNEADIPKDAFIVYQGHHGDRGAQIADIVLPGAAYTEKAGTYVNTEGRVQMTRAATGLPGAARTDWKILRAVSEYLGVRLPYDDVAQLRDRMVEISPALSSYDIIEPPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSA 715
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_BOVIN (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Bos taurus GN=NDUFS1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.038e-38 Identity = 84/168 (50.00%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E A L + ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KMLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDVEGANYFQQASELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_MOUSE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.579e-38 Identity = 82/169 (48.52%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDE-------REPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ ++ + L + E+ ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KMLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLEEVSPNLVRYDDIEETNYFQQASELAKLVNQEVLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_PANTR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan troglodytes GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.122e-37 Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPAT-------LGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E A L + ++ ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_HUMAN (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Homo sapiens GN=NDUFS1 PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.122e-37 Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPAT-------LGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E A L + ++ ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_GORGO (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.122e-37 Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPAT-------LGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E A L + ++ ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_RAT (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.500e-37 Identity = 84/169 (49.70%), Postives = 113/169 (66.86%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPAT-------LGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E A L + E ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KLLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLGEVSPNLVRYDDVEEANYFQQASELAKLVDQEFLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of DR908498 vs. ExPASy Swiss-Prot
Match: NDUS1_MACFA (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.265e-37 Identity = 82/169 (48.52%), Postives = 114/169 (67.46%), Query Frame = 2 Query: 92 KFVYLMGADD--VDLEKLPNDAFVVYQGHHGDRGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPAT-------LGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 571 K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E A L + ++ ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 543 KVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710 The following BLAST results are available for this feature:
BLAST of DR908498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908498 ID=DR908498; Name=DR908498; organism=Citrus sinensis; type=EST; length=628bpback to top |