DR908488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.965e-31 Identity = 80/171 (46.78%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKCRFGKRKATAVDMGTHNINGGDCRENNDDGGSNSKLPAPPMCRNSLNASQGFEEERNDYDANTWTEGDCGGSFNNYLECAL-----IPPNNSTFVFDDEPFIAYLDSF 500 CRLRWKNYLRPNIKRG++S QE+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK ++ A +G + P+ L S G E + ++NTW E ++ ++ L P N T VFD P ++ D F Sbjct: 53 CRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPESIVGA------------------TPFTDKPVMSTELRRSHG---EGGEEESNTWMEETNHFGYDVHVGSPLPLISHYPDN--TLVFD--PCFSFTDFF 198
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.345e-27 Identity = 56/105 (53.33%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKCRFGKRKATAVDMGTHN-INGGDCRENNDDGGSNSKLPAPPM 314 CRLRW NYLRP++KRG I+ EEDLI+R+H+LLGNRWSLIAGR+PGRTDNE+KNYWNTHL KK +D TH ++ + + ++ K P P+ Sbjct: 64 CRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL-----LRQGIDPQTHKPLDANNIHKPEEEVSGGQKYPLEPI 163
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.387e-26 Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 191 CRLRW NYL PN+KRG ++QEEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+KK Sbjct: 57 CRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 119
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.545e-26 Identity = 54/74 (72.97%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKCRFGKRKATAV 224 CRLRW NYL PN+ RG + QEEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+KK G +TAV Sbjct: 53 CRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDH-STAV 125
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.287e-25 Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKCRFGKRK-----ATAVDMGTH 239 CRLRW NYLRPNI+RG IS EEDLIIR+H+LLGNRWSLIAGRLPGRTDNE+KNYWN+ L ++ G A D G+H Sbjct: 53 CRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRRAGAGAGAGGSWVVVAPDTGSH 136
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.867e-25 Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 191 CRLRW NYL PN+ +G ++QEEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+KK Sbjct: 55 CRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 117
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.867e-25 Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 191 CRLRW NYL PN+ +G ++QEEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+KK Sbjct: 55 CRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 117
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 191 CRLRWKNYLRP IKRG IS EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K+ Sbjct: 55 CRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKR 117
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25 Identity = 75/199 (37.69%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK-----CRFGKRKATAVDMGT---------------HNINGGDCRENN----DDGGSNSKLPAPPMCRNSLNASQGFEEERNDY------DANTWTEGDCGGSFNNYLECALIP-----PNNSTFVFDDEPFIAYLD 494 CRLRW NYL+P+IKRG +S E DL++R+HKLLGNRWSLIAGRLPGRT N+VKNYWNTHL+KK C+ +K + T ++N G N D S L +C NS+ ++ ++E++D+ N W E G N A++P + +T FD E + D Sbjct: 49 CRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKKHESSCCKSKMKKKNIISPPTTPVQKIGVFKPRPRSFSVNNGCSHLNGLPEVDLIPSCLGLKKNNVCENSITCNK--DDEKDDFVNNLMNGDNMWLENLLG---ENQEADAIVPEATTAEHGATLAFDVEQLWSLFD 242
BLAST of DR908488 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.891e-25 Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 3 CRLRWKNYLRPNIKRGAISQQEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKCRFGKRKATAVDMGTHNINGGDCRENN----------DDGGSNSKLPAPPMCRNSLNA--SQGFEEERNDYDANTWTEGDCGGSFNNYLECALIPPNNSTFVFDDEPFI 482 CRLRW NYLRP++KRG S +E++LII++H LLGN+WSLIAGRLPGRTDNE+KNYWNTH+ +K + +D TH D +N DD G+ + A P + A S + W +G + L+ + PP + + D +P + Sbjct: 53 CRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL-----TSRGIDPVTHRAINSDHAASNITISFESAQRDDKGAVFRRDAEPAKAAAAAAAISHHVDHHHRSNPQLDWGQGKPLKCPDLNLDLCISPPIHEDPMVDTKPVV 219 The following BLAST results are available for this feature:
BLAST of DR908488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908488 ID=DR908488; Name=DR908488; organism=Citrus sinensis; type=EST; length=630bpback to top |