EY669629

Overview
NameEY669629
Unique NameEY669629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.917e-35
Identity = 76/202 (37.62%), Postives = 120/202 (59.41%), Query Frame = 3
Query:  240 TLTRRFWI-----ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTLTFDF 830
            T+T R+W+     ESK LW + G +I   + +Y +  +T  F GHLG L+LA  SIA   +    +G++LGMASA++T+CGQA+G ++Y  +G+  QR+ ++     V L  LY ++ P+LK +GQ   +A    + +  ++P  ++FA   P+QRFLQ+Q     +A++SL   L+H L TWLV   +  GL+G  L   F
Sbjct:   38 TVTPRWWLKLAVWESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSF 239          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23
Identity = 70/215 (32.56%), Postives = 116/215 (53.95%), Query Frame = 3
Query:  264 ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQ-RFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGT---TLTFDFFLVGFDF----WECLNTLLWGG 884
            E+  L  + GP   +++  + + +++  F GHLG +EL A+++A +VV      +  G+ASA +TL  Q+FGGK    +GV +QR  ++L +CC     +++    +L LL Q  DVA L+ V  +  +P     AF F LQ R+LQSQ   M    V +A+ +V++     ++Y + LG++G+     T  FFL    F    W+ ++   WGG
Sbjct:   43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPA-LPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGG 256          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20
Identity = 61/218 (27.98%), Postives = 108/218 (49.54%), Query Frame = 3
Query:  255 FWIESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQ-RFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTL-------TFDFFLVGFDFWECLNTLLWGG 884
            F  E + L  + GP   +++  + +  I+  F GHLG LEL A+++A  V+      +  G++SA +TL  Q +G +    +GV +QR  ++L +CC     L++    +L L  Q  DV+ L+    +  +P     AF + LQ ++L +Q   +      +A+ LV+ L  ++ +Y + LG++G+ L           FL  +  W  L+   WGG
Sbjct:   31 FLEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPA-LPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGG 247          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.618e-20
Identity = 61/218 (27.98%), Postives = 109/218 (50.00%), Query Frame = 3
Query:  255 FWIESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQ-RFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTL-------TFDFFLVGFDFWECLNTLLWGG 884
            F  E + L  + GP   +++  + +  I+  F GHLG LEL A+++A  V+      +  G++SA +TL  Q +G +    +GV +QR  ++L +CC     L++    +L L  Q  DV+ L+    +  +P     AF + LQ ++L +Q   +      +A+ LV+ L  +L ++++ LG++G+ L           FL  +  W  L+   WGG
Sbjct:   30 FQEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPA-LPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGG 246          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 59/222 (26.58%), Postives = 111/222 (50.00%), Query Frame = 3
Query:  243 LTRRFWIESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLP-VHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIG-----TTLTFDFFLVGFDF--WECLNTLLWGG 884
            L    W E+++L  +  P   S++  + + +++  F GHLG +EL A+S+A T++      +  G+A A +TL  Q FGG    ++G+ +QR  ++L + C     L +    +L L  Q  +V++L+ +  L  LP +  +F +Q  L ++LQ+Q            + + + L  ++++Y + LG++G     T   F   ++ F +  W  L    WGG
Sbjct:   41 LPMEVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQL-LAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGG 261          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 62/217 (28.57%), Postives = 110/217 (50.69%), Query Frame = 3
Query:  264 ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGV-VSLWL--LPVHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTL-------TFDFFLVGFDFWECLNTLLWGG 884
            E + L  + GP    ++  + +  I+  F GHLG LEL A+++A  V+      +  G++SA +TL  Q +G +    +GV +QRS +VL +CC     L++    +L L  Q  DV+ L+   V++++  LP  F +  Q    ++L +Q   +      +A+ LV+ L  +L ++++ LG+IG+ L       T    L  +   + L+   WGG
Sbjct:   34 ELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQV---KYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGG 247          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17
Identity = 61/217 (28.11%), Postives = 109/217 (50.23%), Query Frame = 3
Query:  264 ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGV-VSLWL--LPVHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTL-------TFDFFLVGFDFWECLNTLLWGG 884
            E + L  + GP    ++  + +  I+  F GHLG LEL A+++A  V+      +  G++SA +TL  Q +G +    +GV +QRS ++L +CC     L++    +L L  Q  DV+ L+   V++++  LP  F +  Q    ++L +Q   +      +A+ LV+ L  +L ++++ LG IG+ L       T    L  +   + L+   WGG
Sbjct:   34 ELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQV---KYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGG 247          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 58/215 (26.98%), Postives = 102/215 (47.44%), Query Frame = 3
Query:  264 ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQ-RFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTT-------LTFDFFLVGFDFWECLNTLLWGG 884
            E  +L  + GP   S++  + +  ++  F GHLG  ELA +++A  V+      +  G+ASA +TL  Q FG      +GV +QR  ++L + C     L +   P+L  + Q  +VA LS +     +P     AF + LQ R+LQ+Q           A  +++ L  ++ ++ ++LG+ G+         +   FL  +  W+ L+   W G
Sbjct:   52 EIVELLKLAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPA-LPAAFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDG 265          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 54/203 (26.60%), Postives = 103/203 (50.74%), Query Frame = 3
Query:  249 RRFWI----------ESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGV-VSLWL--LPVHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLLVHLLGTWLVVYKMQLGLIGTTL 818
            RR W+          E + L  +  P   +++  + +  ++  F GHL  LEL A+++A  V+      +  G++SA +TL  Q +G +    +GV +QR  ++L +CC+    L++    +L L  Q   V+ L+   V++++  LP  F +  Q    ++L +Q   +      +A+ LV+ L  +L VY++ LG++G+ L
Sbjct:   18 RRHWLRCLVLSDFREELRALLVLACPAFLAQLMVFLISFVSSVFCGHLSKLELNAVTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQV---KYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSAL 217          
BLAST of EY669629 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 52/194 (26.80%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  243 LTRRFWIESKKLWHIVGPTIFSRMASYSMFVITQAFAGHLGDLELAAISIANTVVVAFNFGLLLGMASALETLCGQAFGGKKYYMLGVYMQRSWIVLFICCVLLLPLYVFASPVLKLLGQPDDVAELSGVVSLWLLPVHFSFAFQFPLQRFLQSQLKTMVIAWVSLASLL----VHLLGTWLVVYKMQLGLIGT 812
            L R FW E++ L+ + GP    ++ ++  +V+   F GHLG +ELA++++    V      +  G++SA +TL  Q+FG      +GV +QR  ++L +CC+    L++    +L L  Q   V+ L+   ++  +P   +      L ++LQ+Q     I W  + S +    V+ +  + +V  + LG+ G+
Sbjct:   52 LPRGFWDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQ----GIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGS 241          
The following BLAST results are available for this feature:
BLAST of EY669629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
TT12_ARATH1.917e-3537.62Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
S47A2_MOUSE4.897e-2332.56Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
S47A1_MOUSE3.880e-2027.98Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_RAT6.618e-2027.98Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A1_XENTR1.057e-1726.58Multidrug and toxin extrusion protein 1 OS=Xenopus... [more]
S47A1_HUMAN1.380e-1728.57Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
S47A1_PONAB2.354e-1728.11Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
S47A1_DANRE2.603e-1626.98Multidrug and toxin extrusion protein 1 OS=Danio r... [more]
S47A1_RABIT1.687e-1526.60Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
S47A2_RABIT8.372e-1526.80Multidrug and toxin extrusion protein 2 OS=Oryctol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-050-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY669629 ID=EY669629; Name=EY669629; organism=Citrus sinensis; type=EST; length=891bp
TTTTGTGTGTTTCCGAATCGCAGTACGGTCGGGATTCCCGGGTCGACCCC
GCGTCCGTGTGTCAAATAGATCCACCCATTTCTCCGCCGAAATCCAACAG
ATAGAAACTACCAGGCATGCCTAGTAACGGTGAGAAAGAAGGGACAAATG
TTCCCTTGCTACAAGATTCAGCTTCGACAAATGTTCCTTTGCTACAAGAT
TCAGCTTCGACGGCTCCATCGCCAGACGATTCAGCTGGAACTCTTACAAG
AAGGTTTTGGATTGAATCTAAAAAGCTGTGGCACATAGTTGGTCCAACAA
TCTTTAGCCGCATGGCCTCTTACTCTATGTTTGTCATCACTCAAGCATTT
GCTGGTCATTTGGGTGATCTTGAGCTTGCTGCCATCTCCATTGCCAATAC
TGTGGTCGTTGCTTTTAACTTCGGCCTCTTGCTGGGAATGGCAAGTGCGT
TAGAAACTCTGTGTGGGCAAGCTTTTGGGGGCAAAAAGTATTACATGTTG
GGCGTCTACATGCAACGTTCATGGATTGTGCTTTTCATATGCTGTGTTCT
GCTTTTGCCTCTGTATGTTTTTGCCTCTCCAGTATTGAAGCTATTGGGCC
AGCCGGATGACGTGGCAGAGCTGTCTGGGGTTGTCTCTCTATGGTTGCTA
CCAGTTCATTTCAGCTTTGCTTTTCAGTTTCCTCTGCAGAGATTCTTGCA
AAGCCAACTTAAGACTATGGTGATTGCATGGGTTTCTTTGGCGTCTCTGT
TGGTACATCTTCTGGGGACTTGGCTGGTTGTGTACAAAATGCAGCTTGGT
TTGATTGGCACAACCCTCACTTTTGATTTTTTCCTGGTGGGTTTTGATTT
TTGGGAATGTTTGAATACGTTGCTTTGGGGGGGGGGGGGCC
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