DR908435 | Citrus Genome Database

Overview


Name	DR908435
Unique Name	DR908435
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	641

Libraries


Library Name	Type
Citrus sinensis phloem	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig2436	contig	Csv1_Contig2436:395..1036.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DR908435 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  193 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 420
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.1889 bits (204), Expect = 4.289e-29
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query:  421 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 543
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 41

HSP 3 Score: 65.855 bits (159), Expect = 4.289e-29
Identity = 33/38 (86.84%), Postives = 33/38 (86.84%), Query Frame = 3

Query:  528 PT*SAELIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 641
            P     LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

HSP 4 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1

Query:    1 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 192
            ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of DR908435 vs. ExPASy Swiss-Prot

BLAST of DR908435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98


Match Name	E-value	Identity	Description
UBIQ_WHEAT	6.412e-36	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	6.412e-36	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	6.412e-36	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	6.412e-36	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	6.412e-36	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	6.412e-36	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	6.412e-36	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	6.412e-36	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	6.412e-36	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	6.412e-36	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_16563 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-42_B10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DR908435 ID=DR908435; Name=DR908435; organism=Citrus sinensis; type=EST; length=641bp
ATTACTCTCGAAGTTGAGAGCTCCGACACGATCGACAACGTCAAGGCCAA
GATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGAGGCTGATCTTCG
CAGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAATATCCAG
AAGGAATCAACACTTCACCTCGTGCTTCGTCTCCGTGGGGGCATGCAGAT
ATTCGTCAAAACCCTAACGGGAAAGACGATTACCCTCGAGGTCGAGAGCT
CCGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATT
CCGCCGGACCAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGG
AAGGACGCTCGCGGATTACAACATTCAGAAGGAATCAACTCTTCATCTGG
TGTTGCGTCTGAGGGGTGGCATGCAGATTTTTGTCAAGACATTGACCGGG
AAGACGATTACCCTGGAGGTGGAGAGTTCGGATACCATTGACAATGTCAA
GGCCAAGATTCAGGACAAGGAAGGGATCCCACCTGATCAGCAGAGCTCAT
CTTCGCTGGGAAGCAGCTTGAGGACGGCCGTACTCTTGCTGATTACAACA
TTCAGAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCCGT