DR908385

Overview
NameDR908385
Unique NameDR908385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9296 contig Csv1_Contig9296:158..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DR908385 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.043e-53
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 3 
Query:   48 SEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHG 461
            SEVRVEGLET+DY D L  KERFTEQ DAI F+ E+D+VYL+ P+KIAIIDHEKK+TF + K+G+PD+VVWNPWDKKAKA+ D G   YK MLCV+ AA+E PI LKP EEWRGR  LS V SSYCSGQLDP +VLHG
Sbjct:  192 SEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPLKVLHG 329
The following BLAST results are available for this feature:
BLAST of DR908385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI2.043e-5371.01Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16513 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-22_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908385 ID=DR908385; Name=DR908385; organism=Citrus sinensis; type=EST; length=651bp
CCATTCTTGTCCTTTTCCGATGGGTTGGATGATGCTGCTTAATTTACAGT
GAAGTGCGTGTCGAAGGCTTGGAGACTCTTGATTACTTTGATTATCTGAT
GAATAAAGAAAGGTTCACAGAGCAGGCGGATGCAATTACCTTTGATGGCG
AGATTGACAGAGTGTATTTGAGCACCCCAACAAAGATTGCCATTATTGAC
CATGAGAAGAAGAGAACCTTTGAACTGCGGAAAGATGGCATGCCAGATTC
AGTTGTGTGGAACCCTTGGGACAAAAAGGCCAAAGCTCTGCCAGATATGG
GGGTTGACGGTTACAAAACCATGTTATGTGTGGATTCTGCTGCAATTGAA
AATCCTATTGTCTTGAAACCCTTTGAAGAGTGGAGGGGCCGTCAAGAGCT
TTCTACTGTGTCGTCAAGCTATTGCAGTGGGCAATTGGATCCTAGGAGAG
TTCTCCATGGCTTTCATTGATTTCATCCACGGACTCAACAAAAGTTTTCT
AGTATTTTGTTTTATTTCTCTTATTTAATGTACAATATCCATGCACTTGC
TTGTCTGTGTATCATCTTTTATTTTAACCAGCTGTATGTAGTAGCTACAA
CAACATACAAAATGTCACAGAATTGAGCAACATAAATATTTATCAATGTT
G
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