DR908335

Overview
NameDR908335
Unique NameDR908335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9220 contig Csv1_Contig9220:747..1409. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSH_VICFA (Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.806e-63
Identity = 110/127 (86.61%), Postives = 124/127 (97.64%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFFLFGA A++VP+LRKERE+GLFKPDPRFEEAK+FIRSG FGSYDYNPLLDSLEGN+GYGRGDYFLVGYDFPSY++AQ++VD+AY+D+K+WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI ECR
Sbjct:  714 ENFFLFGATADEVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLDSLEGNSGYGRGDYFLVGYDFPSYMDAQEKVDEAYRDKKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECR 840          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSH_ARATH (Alpha-glucan phosphorylase, H isozyme OS=Arabidopsis thaliana GN=At3g46970 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.599e-61
Identity = 109/126 (86.51%), Postives = 119/126 (94.44%), Query Frame = -3
Query:  284 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 661
            ENFFLFGA A+QVP+LRKEREDGLFKPDPRFEEAKQF++SG FGSYDY PLLDSLEGNTG+GRGDYFLVGYDFPSY++AQ +VD+AYKD+K WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI  C
Sbjct:  713 ENFFLFGATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEAC 838          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSH_SOLTU (Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.727e-61
Identity = 106/127 (83.46%), Postives = 124/127 (97.64%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            +NFFLFGA A++VP+LRK+RE+GLFKPDPRFEEAKQFIRSGAFG+YDYNPLL+SLEGN+GYGRGDYFLVG+DFPSY++AQ RVD+AYKD+K+W+KMSILST+GSGKFSSDRTI+QYAKEIWNI ECR
Sbjct:  710 DNFFLFGATADEVPQLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDEAYKDRKRWIKMSILSTSGSGKFSSDRTISQYAKEIWNIAECR 836          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSH_WHEAT (Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.655e-58
Identity = 105/126 (83.33%), Postives = 118/126 (93.65%), Query Frame = -3
Query:  284 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 661
            +NFFLFGA A+QV  LRK+RE+GLFKPDPRFEEAKQFIRSGAFG+YDY PLLDSLEGNTG+GRGDYFLVGYDFPSY++AQ RVD+AYKD+KKW+KMSIL+TAGSGKFSSDRTI QYAKEIW I+ C
Sbjct:  704 DNFFLFGAKADQVAGLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYTPLLDSLEGNTGFGRGDYFLVGYDFPSYIDAQARVDEAYKDKKKWVKMSILNTAGSGKFSSDRTIDQYAKEIWGISAC 829          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSL_VICFA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.927e-47
Identity = 87/123 (70.73%), Postives = 103/123 (83.74%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            +NFFLFGA A ++  LRKER  G F PDPRFEE K+F+RSG FGSY+Y+ L+ SLEGN G+GR DYFLVG DFPSYLE Q+ VD+AY+DQKKW +MSIL+TAGS KFSSDRTI +YA+EIWNI
Sbjct:  875 DNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREIWNI 997          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSL1_SOLTU (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.927e-47
Identity = 87/123 (70.73%), Postives = 104/123 (84.55%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            ENFFLFGA A ++  LRKER DG F PD RFEE K+F+RSGAFGSY+Y+ L+ SLEGN G+GR DYFLVG DFPSY+E Q++VD+AY+DQK+W  MSIL+TAGS KFSSDRTI +YAK+IWNI
Sbjct:  838 ENFFLFGAQAHEIAGLRKERADGKFVPDERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNI 960          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSL2_SOLTU (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.112e-46
Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            +NFFLFGA A ++  LRKER +G F PDPRFEE K FIR+G FG+Y+Y  L+ SLEGN GYGR DYFLVG DFP Y+E QD+VD+AY+DQKKW KMSIL+TAGS KFSSDRTI QYA++IW I
Sbjct:  846 DNFFLFGAQAHEIAGLRKERAEGKFVPDPRFEEVKAFIRTGVFGTYNYEELMGSLEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDQKKWTKMSILNTAGSFKFSSDRTIHQYARDIWRI 968          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSL_IPOBA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.104e-45
Identity = 85/123 (69.11%), Postives = 101/123 (82.11%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            ENFFLFGA A ++  LRKER +G F PD RFEE K+FI+ G FGS  Y+ LL SLEGN G+GRGDYFLVG DFPSY+E Q++VD+AY+DQK W +MSIL+TAGS KFSSDRTI +YAK+IWNI
Sbjct:  827 ENFFLFGAEAHEIAGLRKERAEGKFVPDERFEEVKEFIKRGVFGSNTYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQEKVDEAYRDQKIWTRMSILNTAGSYKFSSDRTIHEYAKDIWNI 949          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHS2_DICDI (Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.257e-23
Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = -3
Query:  287 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD-YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 661
            EN ++FGA +E+V K++K   DG F PD R+      I+   FG ++ +  +++S+ G       D++++ YDF SYL+ Q+ +DQ +KD+ KW K SI+++   GKFSSDRTI +YA++IW I E
Sbjct:  789 ENMYIFGARSEEVNKVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGN-----DHYILSYDFGSYLDIQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEE 909          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHS1_DICDI (Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.729e-18
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = -3
Query:  284 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD-YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 661
            EN F+FG    +V   R++  +     DPR +E    I  G FG  D + P+LDSL  +      D++L   DFP YL++Q  VD+ +KDQ  W+K SI+++A +  FSSDR + +YA++IW+I  C
Sbjct:  723 ENMFIFGLRTSEVEAAREKMTNKEVNIDPRLQEVFLNIELGTFGPPDVFRPILDSLIFS------DFYLSIQDFPLYLDSQASVDELWKDQSAWVKKSIINSASTYFFSSDRAMNEYAEQIWDIKPC 843          
The following BLAST results are available for this feature:
BLAST of DR908335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PHSH_VICFA3.806e-6386.61Alpha-glucan phosphorylase, H isozyme OS=Vicia fab... [more]
PHSH_ARATH1.599e-6186.51Alpha-glucan phosphorylase, H isozyme OS=Arabidops... [more]
PHSH_SOLTU2.727e-6183.46Alpha-glucan phosphorylase, H isozyme OS=Solanum t... [more]
PHSH_WHEAT1.655e-5883.33Alpha-glucan phosphorylase, H isozyme OS=Triticum ... [more]
PHSL_VICFA2.927e-4770.73Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL1_SOLTU2.927e-4770.73Alpha-1,4 glucan phosphorylase L-1 isozyme, chloro... [more]
PHSL2_SOLTU1.112e-4669.92Alpha-1,4 glucan phosphorylase L-2 isozyme, chloro... [more]
PHSL_IPOBA6.104e-4569.11Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHS2_DICDI2.257e-2341.27Glycogen phosphorylase 2 OS=Dictyostelium discoide... [more]
PHS1_DICDI3.729e-1839.37Glycogen phosphorylase 1 OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16463 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908335 ID=DR908335; Name=DR908335; organism=Citrus sinensis; type=EST; length=663bp
CTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTTCAAA
ACCTGGAAATTCTTATAAAGATAGAATTGTTTAAGAAATTACAACTTAAA
ACTTATCTGACAGAGCGATGTTTGAGTAAACAAATGATGGTTAAGACGGA
GAGACAGGTTTATTTAATGATCCCCACAGATTGTGGATTTCCTTTCATTT
TCTTCCCATCTTAATACATCCTTCCAAGAAATTATATAACCTATTGCACA
TGAAAATTTTTTGCACTTGAATCATGATGTACGGCATTCTGTTATGTTCC
AGATTTCCTTAGCATACTGTGCAATTGTGCGATCACTGCTGAATTTCCCA
CTGCCAGCTGTACTTAATATAGACATCTTCAGCCACTTCTTCTGGTCCTT
GTAAGCTTGGTCAACTCTGTCCTGAGCCTCTAAGTAACTTGGGAAGTCAT
AACCAACTAGAAAATAATCACCACGACCATAACCAGTGTTCCCCTCCAGG
GAATCAAGAAGCGGGTTGTAGTCATAGCTTCCAAATGCTCCACTTCTTAT
AAATTGCTTGGCCTCTTCAAACCGAGGATCTGGTTTGAACAATCCATCTT
CTCTTTCCTTACGCAGCTTAGGGACTTGTTCTGCTACTGCACCAAAGAGA
AAGAAATTCTCCT
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