DR908266

Overview
NameDR908266
Unique NameDR908266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908266_ssr666 microsatellite DR908266_ssr666:666..680. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.643e-40
Identity = 87/133 (65.41%), Postives = 106/133 (79.70%), Query Frame = 2
Query:  119 EQENELQEKVKRAQGIQVAKSGNLVFCAGEAQ---LYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            E+E + QE  +R     +  SGNLVFC GE++   +YT++QLMRASAELLG+GS+G TYKAVLDN+LIV VKRLDA+K A TS E +E HME VGGLRH NLVP+R+YFQ+  ERL+IYDY PNGSLF+LIHG
Sbjct:  356 EKEVQFQETEQR-----IPNSGNLVFC-GESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHG 482          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24
Identity = 55/107 (51.40%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  188 LVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            LVF  G    + L+ L+RASAE+LGKGS+GT+YKAVL+    V VKRL   K    S + +E  ME VG ++HPN++PLRAY+ +K+E+LL++D+ P GSL +L+HG
Sbjct:  334 LVFTEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRL---KDVMASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHG 437          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 2
Query:  161 GIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            G+Q A+   LVF  G +  + L+ L+RASAE+LGKGS GTTYKA+L+    V VKRL   K        +EQ ME+VG +  H N+ PLRAY+ +K+E+LL+YDY   G+   L+HG
Sbjct:  315 GVQEAEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL---KEVAAGKREFEQQMEAVGRISPHVNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHG 428          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 2
Query:  128 NELQEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            NE      +A  +  +    LVF     +++ L+ L+RASAE+LGKG+ GT YKAVLD   +V VKRL    +A   +  +++ +E VG + H NLVPLRAY+ + +E+LL+YD+ P GSL +L+HG
Sbjct:  328 NEYSPSAVKAVEVNSSGMKKLVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMA---DREFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHG 451          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22
Identity = 59/128 (46.09%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  134 LQEKVKR--AQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            L EK K+    G+Q  +   LVF  G +  + L+ L+RASAE+LGKGS GT YKAVL+    V VKRL   K        +EQ ME +  +  HP++VPLRAY+ +K+E+L++ DY P G+L SL+HG
Sbjct:  321 LTEKAKQEFGSGVQEPEKNKLVFFNGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRL---KEVAAGKREFEQQMEIISRVGNHPSVVPLRAYYYSKDEKLMVCDYYPAGNLSSLLHG 445          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22
Identity = 52/107 (48.60%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  188 LVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            LVF     +++ L+ L+RASAE+LGKG+ GT YKAVLD   +V VKRL    +A   ++ +++ +E VG + H NLVPLRAY+ +++E+LL+YD+ P GSL +L+HG
Sbjct:  354 LVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMA---DKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHG 457          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 2
Query:  125 ENELQEKVKRAQGIQVAK----SGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            +N+LQ+K   +    V++    +  L F  G    + L+ L+RASAE+LGKG+ GTTYKAVL++   V VKRL   K        +EQ ME +GG++H N+V L+AY+ +K+E+L++YDY   GS+ SL+HG
Sbjct:  295 DNKLQKKGGMSPEKFVSRMEDVNNRLSFFEGCNYSFDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRL---KDVAAGKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDYFSRGSVASLLHG 423          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20
Identity = 46/108 (42.59%), Postives = 73/108 (67.59%), Query Frame = 2
Query:  188 LVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGK 511
            +VF  G+  ++ L+ L+RASAE+LGKG  GTTYK  L++   + VKR+   K        +EQ +E++G ++H N+  LR YF +K+E+L++YDY  +GSL +L+HG+
Sbjct:  291 IVFFEGKNLVFDLEDLLRASAEVLGKGPFGTTYKVDLEDSATIVVKRI---KEVSVPQREFEQQIENIGSIKHENVATLRGYFYSKDEKLVVYDYYEHGSLSTLLHGQ 395          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20
Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 2
Query:  161 GIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHG 508
            G+Q  +   L F       + L+ L++ASAE+LGKGS GT YKAVL++   V VKRL   +    S + +EQ ME VG + +H N VPL AY+ +K+E+LL+Y Y   GSLF ++HG
Sbjct:  321 GVQDPEKNKLFFFERCNHNFDLEDLLKASAEVLGKGSFGTAYKAVLEDTTAVVVKRL---REVVASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHG 434          
BLAST of DR908266 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 2
Query:  182 GNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGK 511
            G +VF  G    + LD L+ ASAE+LGKG+  TTYK  +++   V VKRL+   +       +EQ ME VG +RH N+  L+AY+ +K ++L +Y Y   G+LF ++HGK
Sbjct:   40 GKIVFFGGSNYTFDLDDLLAASAEILGKGAHVTTYKVAVEDTATVVVKRLEEVVVG---RREFEQQMEIVGRIRHDNVAELKAYYYSKIDKLAVYSYYSQGNLFEMLHGK 146          
The following BLAST results are available for this feature:
BLAST of DR908266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
Y5720_ARATH1.643e-4065.41Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y2267_ARATH4.803e-2451.40Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y3868_ARATH1.183e-2247.86Probable inactive receptor kinase At3g08680 OS=Ara... [more]
RLK90_ARATH1.545e-2243.31Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y5830_ARATH2.635e-2246.09Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y1848_ARATH2.635e-2248.60Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y4374_ARATH7.668e-2243.18Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y5332_ARATH2.467e-2042.59Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y5516_ARATH9.374e-2045.30Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5168_ARATH1.768e-1841.82Probably inactive receptor-like protein kinase At5... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16394 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908266 ID=DR908266; Name=DR908266; organism=Citrus sinensis; type=EST; length=680bp
TGTTTTGTTTGCAATGGCTGTGAAGAAACAGAAACAGAGGAAAGATAAAA
AATCAAAGGCTATGATTGCATCGGATGAAGCGGCGGCAACGGCTCAAGCT
TTAGCCATGATTCAAATAGAGCAAGAGAATGAGTTGCAGGAGAAGGTGAA
GAGAGCACAAGGGATCCAAGTGGCCAAGAGTGGAAACTTAGTATTCTGTG
CGGGCGAGGCACAGCTGTATACGCTGGACCAGCTGATGAGGGCTTCTGCT
GAGTTGCTTGGGAAAGGGTCTCTGGGGACCACGTACAAGGCAGTGTTGGA
CAACCGTCTGATTGTTTGCGTGAAGCGGCTTGATGCAAGCAAATTAGCAG
GCACAAGCAATGAAATGTATGAGCAGCATATGGAATCAGTTGGTGGACTC
AGGCATCCAAATCTTGTGCCGCTCAGAGCTTATTTTCAGGCCAAGGAGGA
GAGACTCCTTATCTATGATTATCAGCCCAATGGCAGTCTCTTCTCGCTCA
TACACGGTAAGTTCCTTTGCTCTTGATTTTTTTTTTGTTTTTTTTCATGT
GTGGTGCAATTACTCAGTGAGTGAGCCCATTAGGTGATTGGACTCGATCT
TGACTCGGTTTGACCGCGGTGACCCCTAGAATATGTAGCCACGTAAGATT
TTTATTTGCAATCGAATTATTATTATTATT
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