DR908249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_RAT (Protein MEMO1 OS=Rattus norvegicus GN=Memo1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.119e-47 Identity = 93/174 (53.45%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCKT 509 ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y QSSQC++ Sbjct: 108 KIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKSGMNMSFSFLNYAQSSQCRS 281
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_MOUSE (Protein MEMO1 OS=Mus musculus GN=Memo1 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.320e-47 Identity = 93/174 (53.45%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCKT 509 ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y QSSQC++ Sbjct: 108 KIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRS 281
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_MACFA (Protein MEMO1 OS=Macaca fascicularis GN=MEMO1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47 Identity = 93/173 (53.76%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCK 506 ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y QSSQC+ Sbjct: 108 KIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCR 280
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_HUMAN (Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47 Identity = 93/173 (53.76%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCK 506 ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y QSSQC+ Sbjct: 108 KIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCR 280
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_XENLA (Protein MEMO1 OS=Xenopus laevis GN=memo1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.548e-46 Identity = 92/174 (52.87%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCKT 509 +V EL TG FE M + DE EHS+EMHLPY AK E H + IVP+LVGA++ E +G++F+KY+ DP+N F +SSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP F YL +Y NTICGRHPI V L+ L + FL Y QSSQC++ Sbjct: 108 KVYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDDLTIVPVLVGALSESKEQEFGKVFSKYLADPTNLFVISSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMSIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRS 281
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_XENTR (Protein MEMO1 OS=Xenopus tropicalis GN=memo1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 92/174 (52.87%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEQSSQCKT 509 +V +L TG FE M + DE EHS+EMHLPY AK E H + IVP+LVGA++ E +G+LF+KY+ DP+N F +SSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP F YL +Y NTICGRHPI V L+ L + FL Y QSSQC++ Sbjct: 108 KVYGDLWKTGMFERMSLQTDEDEHSIEMHLPYTAKTMESHKDDLTIVPVLVGALSESKEQEFGKLFSKYLADPTNLFVISSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMGIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRS 281
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_DANRE (Protein MEMO1 OS=Danio rerio GN=memo1 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46 Identity = 91/173 (52.60%), Postives = 112/173 (64.74%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTK---IKIKFLRYEQSSQCK 506 +V +L TG FE M + DE EHS+EMHLPY AK E H IVP+LVGA++ E YG+L +KY+ DPSN F +S DFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ + + FL Y QSSQC+ Sbjct: 108 KVYADLWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMENHKDEFSIVPVLVGALSGSKEQEYGKLLSKYLADPSNLFIISPDFCHWGQRFRYTYYDESQGEIYRSIEHLDKMGMGIIEQLDPISFSNYLKKYHNTICGRHPIGVLLNAVAELKKNGIDMNFSFLNYAQSSQCR 280
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_BOVIN (Protein MEMO1 OS=Bos taurus GN=MEMO1 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.092e-43 Identity = 86/168 (51.19%), Postives = 112/168 (66.67%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHP--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTK-IKIKFLRYEQSS 497 ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ +PSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ + + + F ++Q+S Sbjct: 108 KIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLAEPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFFQQAS 275
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: MEMO1_DICDI (Protein MEMO1 homolog OS=Dictyostelium discoideum GN=memo1 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.557e-41 Identity = 86/168 (51.19%), Postives = 109/168 (64.88%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGH--PIKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTKIKIKFLRYEQSSQ 500 + +L TG F VDE EHS+E+ LPY+AKV E + IVPI+VG+++ + E +YG++ A Y DDP NFF +SSDFCHWG RF Y Y+ K I+K IE LD+ GM+IIE+GDP F KYL E NTICGR PI+V L + N K I L YEQSS+ Sbjct: 103 DTTNKLFDTGSFIWNTKSVDEDEHSLELQLPYIAKVAEKRLLELSIVPIMVGSLSIDLEELYGKILAPYFDDPENFFVISSDFCHWGERFGYTRYENKEVPIYKYIEELDRKGMEIIESGDPVQFSKYLKETKNTICGRCPIAVMLWITKNSQFKYNISSLYYEQSSK 270
BLAST of DR908249 vs. ExPASy Swiss-Prot
Match: TG253_CAEEL (UPF0103 protein tag-253 OS=Caenorhabditis elegans GN=tag-253 PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.897e-36 Identity = 76/174 (43.68%), Postives = 112/174 (64.37%), Query Frame = 3 Query: 3 EVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHPIKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGV-IHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFL----HMLGNCSTKIKIKFLRYEQSSQCKT 509 ++ EEL+AT F+LMD +E+EHS+EM LP++AKV IVP+LVG++ + YG +FA Y++DP N F +SSDFCHWG RF++ YD+ + I++ I +DK GM IET +P AF YL + NTICGR+PI + L H + + + +FL Y QS++ ++ Sbjct: 159 KINEELRATRHFDLMDRRDEESEHSIEMQLPFIAKVMGSKRYTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVISSDFCHWGERFSFSPYDRHSSIPIYEQITNMDKQGMSAIETLNPAAFNDYLKKTQNTICGRNPILIMLQAAEHFRISNNHTHEFRFLHYTQSNKVRS 332 The following BLAST results are available for this feature:
BLAST of DR908249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908249 ID=DR908249; Name=DR908249; organism=Citrus sinensis; type=EST; length=684bpback to top |