DR908189

Overview
NameDR908189
Unique NameDR908189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1740 contig Csv1_Contig1740:319..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DR908189 vs. ExPASy Swiss-Prot
Match: UMP6_ARATH (Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62
Identity = 113/155 (72.90%), Postives = 135/155 (87.10%), Query Frame = 1 
Query:    1 EIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYERYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 465
            ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT Y+RYA YLD+F P+E YL+KKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct:  103 DVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257
The following BLAST results are available for this feature:
BLAST of DR908189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UMP6_ARATH8.049e-6272.90Uncharacterized protein At1g47420, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16317 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-36_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908189 ID=DR908189; Name=DR908189; organism=Citrus sinensis; type=EST; length=699bp
GAAATTCAGCGTGCTTTCAAGGACTTGATGGCTGCAGACTGGGGTGAGCT
TCCTGCTTCTGTCATCCATGATGCAAAGAGTGCGTTGTCCAGAAATAATG
ATGACAAGGCTGGCCAGGAGGTCTTGAAAAATGTTTTCAGTGCTGCTGAA
GCAGTTGAGGAATTCATTGGGATTATTATGAACATTAAAATGGAATTTGA
TGATGAAATTGGGCTAAGTGGTGAGAATGTAAAACCCTTGTCAAATGAAT
TATCCTCTGCAATTCGTACAGTTTATGAACGTTATGCTACCTACTTGGAT
GCATTTGGCCCTGATGAATCCTATCTGCGGAAGAAGGTAGAAACAGAGTT
GGGTTCAAAAATGATTTTCCTAAAGATGAGATGTGCCGGCCTTGGTTCTG
AGTGGGGAAAGGTTACTGTTCTTGGAACCTCAGGACTTGCGGGGTCATAT
GTTGAACAGAGAGCTTAGCCCATAGCTGAAAGGTTTATTGTGATTATGGG
TTTCTTTACATCTGGAACTTGCTTCTGAGTAGTGGGAGACAATTTGTTAT
ACTCACTCCAGCAAAACCGCGGTTGGAATTGCATGGCAGATGAATAAAAG
CTTCTTTTGTCAGCAGTAACTAAGAATTAATAAATCTGTGGTTTATCGTG
TTTTCATCTGGTTTGGGAAATTCTGGTTCATATATTTCTTTTAAAAAAA
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