DR908185

Overview
NameDR908185
Unique NameDR908185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6329 contig Csv1_Contig6329:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908185 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = -2
Query:   75 ADCTSLGYGTSCGNLDARGNISYAFNSYYQINNQLDSACRFPNLSAVTTTNPSTGDCLFRIMIKT-DTTAGAGERRLSRSVGLLAYILTFVFIIM 356
            ADCTSLGYG+SCGNL+   N+SYAFNSYYQ++NQLDSAC+FP LS V+T +PS G C F+IMIK+ D +  +    ++RS  +L  +   ++I++
Sbjct:  390 ADCTSLGYGSSCGNLNLAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCKFKIMIKSEDASEASAMMPITRSTAVLLLLSICLYIVL 484          
BLAST of DR908185 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = -2
Query:   84 DCTSLGYGTSCGNLDARGNISYAFNSYYQINNQLDSACRFPNLSAVTTTNPSTGDCLFRIMIKTDTTAGAGERRLSRSVGLLAYILTFVF 353
            DCTSLG GTSC NLD + NISYAFNSYYQI +QLD+AC+FPN+S VT T+PSTG C F IMI+      A E      + ++A I   +F
Sbjct:  388 DCTSLGVGTSCANLDGKQNISYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTGTCRFPIMIEPYYGGAAREHGFFFPLLMVAAIAVSIF 477          
BLAST of DR908185 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -2
Query:   93 WADCTSLGYGTSCGNLDARGNISYAFNSYYQINNQLDSACRFPNLSAVTTTNPSTGDCLFRIMIKTDTTAGAGERRLSRSVGLLAYILT 359
            ++DCT+LGYG+SC  LDA GN SYAFN ++Q+ NQ +SAC F  L+ +TT N S G C F I I   + +       S  V ++ ++L+
Sbjct:  389 FSDCTALGYGSSCNTLDANGNASYAFNMFFQVKNQDESACYFQGLATITTQNISQGQCNFPIQIVASSASSFSCSSYSLVVLIVWFLLS 477          
The following BLAST results are available for this feature:
BLAST of DR908185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
E135_ARATH5.101e-2453.68Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E136_ARATH1.389e-2156.67Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E138_ARATH2.537e-1543.82Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16313 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-39_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908185 ID=DR908185; Name=DR908185; organism=Citrus sinensis; type=EST; length=702bp
GAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTAAAGATTGAACTCA
AATGCACTGAAGCTCTGATATTTACATAATTATAAACACGAATGTCAATA
TGTATGCCAGCAGACCAACAGACCTTGATAATCTCCTCTCCCCTGCGCCT
GCGGTAGTATCTGTTTTGATCATGATCCTGAATAGGCAATCCCCTGTGGA
TGGATTTGTGGTGGTAACAGCCGAAAGGTTTGGAAACCTGCATGCACTGT
CAAGCTGATTATTTATCTGGTAGTAGCTGTTGAATGCATATGAAATGTTC
CCACGAGCGTCCAAATTCCCACAGGAAGTTCCATATCCAAGACTTGTGCA
ATCAGCCCACTCCCTCACCTCACCCGTCCTCTTCCTGTTCCACGGCCATC
AATGGCGGTGCGAGTCGACAACAATCAACTGCGGCGGCTGATCTTCGTCT
CCGGTAACGATTAACGACGGCGCAAGCACAGCTGATCTGTGCGCTAGCTC
AAGCTTGGCCGATCTGTTGCTTGCTCGATTACTCTTCCTATATTCACTCA
GAGTAACTGTTTGACAAGAGTCGAAGTCCAAGTTTTTTTTTAATTGAAGT
TTTAATTTAATTTTTATTTTTTAACTTGGTTTAGAACATAAATTCATTCT
TTAATTTTGATTTTCTGAGAAGTTAATGAATATATAATGAAACTATGTGT
CT
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