DR908181 | Citrus Genome Database

Overview


Name	DR908181
Unique Name	DR908181
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	703

Libraries


Library Name	Type
Citrus sinensis phloem	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9569	contig	Csv1_Contig9569:816..1515.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of DR908181 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  157 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 384
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query:    1 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 156
            NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1

Query:  385 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 504
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 40

HSP 4 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2

Query:  434 LRVRTQLTM*RLRSRI--RRGFPQTSQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 604
            L V +  T+  ++++I  + G P   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

The following BLAST results are available for this feature:

BLAST of DR908181 vs. ExPASy Swiss-Prot

BLAST of DR908181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96


Match Name	E-value	Identity	Description
UBIQ_WHEAT	7.650e-36	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	7.650e-36	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	7.650e-36	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	7.650e-36	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	7.650e-36	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	7.650e-36	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	7.650e-36	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	7.650e-36	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	7.650e-36	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	7.650e-36	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_16309 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-49_H11 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DR908181 ID=DR908181; Name=DR908181; organism=Citrus sinensis; type=EST; length=703bp
AATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGATCAACA
GAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACTCTTGCTG
ACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTCGTCTCCGT
GGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACAATTACTCT
TGAGGTTGAAAGTTCTGACACCATTGACAACGTGAAAGCAAAAATTCAAG
ACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTGCTGGAAAG
CAGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAGAAAGAATC
CACTCTTCACTTGGTTCTTCGCCTCCGTGGTGGTATGCAGATTTTTGTGA
AGACACTCACTGGGAAAACCATCACGTTGGAGGTTGAGAGTTCGGACACA
ATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAGGGGATTCCCCCAGA
CCAGCCAGAGGTTGATCTTTGCTGGAAAACAACTTGAGGATGGAAGGACT
CTTGCTGATTACAACATCCAGAAGGAGTCCACTCTGCATCTTGTGCTCCG
ACTCCCGTGGAGGTTTCTGAGTTTGGTCATCTGGGGGGTGGTGTGTGTCT
ATTTTGCTTCGGGTTGTCTTGGTAATGTTTGCTGGCTATTGGTGAATAGC
TTA