DR908177

Overview
NameDR908177
Unique NameDR908177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908177_ssr53 microsatellite DR908177_ssr53:53..64. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41
Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            ++DF+G+NYY   YA+                  R  L+  ++G PIG     PW+++YP+G +D +LY+K  Y NP +YITENGV +   K +   +A KDD RI+ Y +HL  LL AI++G +VKGY+AWS LDNFEW  G+TV FG+ +VD+ D  +RYPK+S  W+K FL
Sbjct:  337 AFDFIGLNYYTANYADNLPPSNGLNNSYTTDS--RANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 508          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.976e-40
Identity = 79/174 (45.40%), Postives = 107/174 (61.49%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            S+DF+G+NYY   YA                   R  L+  ++G PIG     PW+++YP+G ++ +LY+K  Y NP IYITENGV +   K +   +A KDD RI  Y +HL  LL AI++G +VKGY+AWS LDNFEW  G+TV FG+ +VD+ D  +RYPK S  W+K FL
Sbjct:  333 SFDFIGLNYYTSNYA--GSLPPSNGLNNSYSTDARANLTAVRNGIPIGPQAASPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKTLPLQEALKDDTRIDYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEFL 504          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.660e-40
Identity = 76/174 (43.68%), Postives = 113/174 (64.94%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            ++DF+G+NYYA  YA+                  ++T S  ++G PIG      W ++YP+G+++ +L+IK  Y NP IYITENGV +   K +   +A KDD+RI+ Y +HL  LL A+++G +VKGY+AWS LDNFEW  G+TV FG+ +VD+ + ++RYPK+S  W+K FL
Sbjct:  360 AFDFIGLNYYASSYADNDPPSYGHNNSYNTDSHAKITGS--RNGIPIGPQAASFWFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 531          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.298e-39
Identity = 78/182 (42.86%), Postives = 110/182 (60.44%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFLAPPKSPAN 542
            ++DF+G+NYY   YA+                  ++T S  ++G PIG      W  +YP+GI + +LY+K  Y NP IYITENGV +   K +   +A KDD RI+ Y +HL  LL A+++G +VKGY+AWS LDNFEW  G+TV FG+ +VD+ D ++RYPK+S  W+K FL       N
Sbjct:  337 AFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGS--RNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGN 516          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL17_ARATH (Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGLU17 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.358e-37
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADAKDVEQAQ--ARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFLAPPKS 533
            S+DF G+NYY   Y E                  RV  +T K+G P+G PT+  W+F+ P+G +D +LYIKSK+ NP I +TENG+    D   +   A  D+ +IK +Q HL  LLEA+ +G  V+GYY WS +D+FEW+ G+   +G+VYVD +D L+R+ K S  WY  FL+   S
Sbjct:  337 SFDFFGLNYYTSRYVEDVMFYANTNLSYTTDS--RVNQTTEKNGVPVGEPTSADWLFICPEGFQDVLLYIKSKFQNPVILVTENGMPSENDKSLSVNIALNDEAKIKYHQLHLTALLEAVSQGADVRGYYIWSLMDDFEWEFGYKYRYGLVYVDFQDGLKRHLKSSALWYHHFLSNSSS 513          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35
Identity = 72/178 (40.45%), Postives = 105/178 (58.99%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFLAPPK 530
            SYDF+G+NYY   YA+                  R   +  ++G PIG     P  F YP G+++ +LY K +YNNP IY+TENG+A+   K +   +A KD  RI+ + +HL ++  AIK GV+VKGY+ W+F+D FEW  G+   FG++Y+D  +NL+RY K S +W  +FL   K
Sbjct:  318 SYDFIGVNYYTTYYAKSVPLPSSNRLSYDTDI--RANTTGFRNGKPIGPQEFTPIFFNYPPGLRELLLYTKRRYNNPIIYVTENGIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGYLDRFGLIYIDRLNNLKRYHKQSSYWIANFLKRKK 493          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35
Identity = 70/174 (40.23%), Postives = 107/174 (61.49%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADA--KDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            S+DF+G+NYY   Y +                     +   ++G  IG      W+++YPKGI++ +LY K  YNNP IYITENGV +   +++   +A  D  RI+ Y++HL+++  A+++GV V+GY+AWS  DNFEW  G++V FG+ Y+D+KD L+RYPK S  W ++FL
Sbjct:  331 SFDFIGLNYYTARYIQGTKQDSNSHKSYSTDSLTNERVE--RNGTDIGPKAGSSWLYIYPKGIEELLLYTKRTYNNPTIYITENGVDEVNNENLSLKEALIDTTRIEFYRQHLFHVQRALRQGVDVRGYFAWSLFDNFEWMDGYSVRFGINYIDYKDGLKRYPKRSSQWLQNFL 502          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL16_ARATH (Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35
Identity = 75/172 (43.60%), Postives = 105/172 (61.05%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADAKDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            SYDF+G+NYY+ +YA+                   V+L   ++G PIG      W+ +YPKGI+D +L+ K +YN+P +YITENGV +A   +      DDLRI  Y  HL  + +AI  GV+VKGY+AWS +DNFEW  G+TV FG+V+VD +D  +RY K S  W++  L
Sbjct:  334 SYDFIGVNYYSSLYAKDVPCATENITMTTDSC---VSLVGERNGVPIGPAAGSDWLLIYPKGIRDLLLHAKFRYNDPVLYITENGVDEANIGKIFL--NDDLRIDYYAHHLKMVSDAISIGVNVKGYFAWSLMDNFEWSEGYTVRFGLVFVDFEDGRKRYLKKSAKWFRRLL 500          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34
Identity = 70/172 (40.70%), Postives = 102/172 (59.30%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADAKDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFL 518
            SYDF+G+NYY   YA+                  R   +  ++G PIG     P  F YP G+++ +LY K +YNNP IY+TENG+ +  +    +A KD  RI+ + +HL ++  AIK GV+VKGY+ W+F+D FEW  G+   FG++YVD K  L+RY K+S +W + FL
Sbjct:  329 SYDFIGVNYYTTYYAKSIPPPNSNELSYDLDN--RANTTGFRNGKPIGPQEFTPIFFNYPPGLRELLLYTKRRYNNPTIYVTENGIDEGNNSTLPEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGYLDRFGLIYVDRK-TLKRYRKESSYWIEDFL 497          
BLAST of DR908177 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34
Identity = 75/177 (42.37%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 SYDFLGINYYAPMYAEXXXXXXXXXXXXXXXXXXRVTLSTHKDGNPIGTPTTLPWIFLYPKGIKDFMLYIKSKYNNPAIYITENGVADAKDVEQAQARKDDLRIKCYQEHLWYLLEAIKEGVHVKGYYAWSFLDNFEWDAGFTVGFGMVYVDHKDNLQRYPKDSFFWYKSFLAPPKS 533
            SYDF+GINYY+  YA+                    +++  +DG PIG      W+ +YPKGI+D +LY K K+ +P +YITENG  +          KD  RI  Y  HL  + +AI  G +VKG++AWS LDNFEW  G+TV FG+VYVD KD  +RYPK S  W++  L   K+
Sbjct:  334 SYDFIGINYYSSTYAKDVPCSTKDVTMFSDPC---ASVTGERDGVPIGPKAASDWLLIYPKGIRDLVLYAKYKFKDPVMYITENGRDEFST--NKIFLKDGDRIDYYARHLEMVQDAISVGANVKGFFAWSLLDNFEWAMGYTVRFGLVYVDFKDGCKRYPKKSAEWFRKLLNEKKN 505          
The following BLAST results are available for this feature:
BLAST of DR908177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
BGL12_ORYSJ5.997e-4144.83Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL13_ORYSJ2.976e-4045.40Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGL10_ORYSJ8.660e-4043.68Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]
BGL11_ORYSJ4.298e-3942.86Beta-glucosidase 11 OS=Oryza sativa subsp. japonic... [more]
BGL17_ARATH2.358e-3741.90Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGL... [more]
BGL29_ORYSJ1.294e-3540.45Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
BGL24_ORYSJ1.294e-3540.23Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]
BGL16_ARATH1.294e-3543.60Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGL... [more]
BGL30_ORYSJ1.095e-3440.70Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL15_ARATH1.095e-3442.37Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16305 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908177 ID=DR908177; Name=DR908177; organism=Citrus sinensis; type=EST; length=703bp
GGTCGTATGATTTTCTTGGCATAAATTACTACGCACCAATGTACGCTGAA
GATTCTTCTTCTTCAACCTCCAACTCCGACACAATAAGTTACTCCACAGA
TAGCCGAGTCACTCTCTCAACCCACAAAGATGGTAATCCCATTGGTACAC
CGACAACTTTGCCATGGATTTTCCTCTACCCCAAGGGAATCAAAGATTTC
ATGCTGTATATAAAGAGTAAATACAACAATCCTGCAATTTATATCACTGA
GAACGGAGTTGCTGATGCAAAGGATGTAGAGCAGGCTCAGGCCCGCAAGG
ATGATTTGAGAATAAAATGCTATCAAGAGCATCTCTGGTATCTTTTGGAA
GCCATCAAGGAGGGCGTGCATGTGAAGGGATACTATGCGTGGTCGTTTTT
GGATAACTTCGAATGGGATGCTGGATTCACCGTTGGATTTGGGATGGTTT
ATGTTGATCATAAGGATAACTTGCAAAGATACCCCAAGGACTCCTTTTTT
TGGTACAAGAGCTTCCTAGCTCCTCCTAAATCCCCCGCCAACGCTTTTGA
TGAACTTTGATTCACTCAGCGCAAATTTTTTCTCTTTTTTGCCCCCCCTT
TTCCACTGGCATGCTTATATTAATTATTTCTTCTATGCATTTTCTTTTCT
TCAGCCTTCGTTCCTATGTAATAATTAACTGTACTCAATAATCGTTGCAC
TCG
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