DR908103

Overview
NameDR908103
Unique NameDR908103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7789 contig Csv1_Contig7789:148..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.052e-17
Identity = 53/132 (40.15%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSET--GFKTVTTKSTSNTFQNYTILEVQEIPAS 588
            +FF  +DL  G+KM L+      +  A  LPR  ADS PF+ ++LP IL   S+P  SP A AM  TL  CE  P   E K CATSLESM++FA S  G+       T   ++     Q Y +  V+ +P S
Sbjct:   27 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVS 156          

HSP 2 Score: 23.8682 bits (50), Expect = 3.052e-17
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  591 MVACHYMSYPYA 626
            MVACH M+Y YA
Sbjct:  160 MVACHGMAYAYA 171          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.137e-16
Identity = 55/133 (41.35%), Postives = 70/133 (52.63%), Query Frame = 1
Query:  193 VKIFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSE--TGFKTVTTKSTSNTFQNYTILEVQEIPA 585
            V +FF  +DL  G  MA++           FLPR EAD+ PFS +++P IL   S+   S +A  M  TLR CE  P + E K CATSLESM+DFA S  G+       TV  K  S   Q YT+  V+   A
Sbjct:  210 VALFFLEKDLHPGKTMAVHFTATTAGEK--FLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPE-QEYTVTAVKRAAA 339          

HSP 2 Score: 21.9422 bits (45), Expect = 4.137e-16
Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 3
Query:  588 QMVACHYMSYPYAFTA 635
            Q+VACH   Y YA  A
Sbjct:  345 QLVACHAEPYAYAVFA 360          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 1
Query:  190 EVKIFFTLRDLKVGNKM--ALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS---ETGFKTVTTKS--TSNTFQNYTILEVQEIPASRW*LVITCPILMHLRLHSHMTETST 663
            ++ +FF  ++L+ G K+  AL+      + ++ FLPR +ADS PFS K+LP IL+   +   S  A  M  TL+ CE    K E K CATSLES++DF  S FG+   +     V +K+  +S+  Q+YT+  V+ +  +   +        +     H+TE +T
Sbjct:  359 DMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAGTGQLIACHPESYPYAVFMCHLTEATT 523          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.789e-13
Identity = 50/136 (36.76%), Postives = 67/136 (49.26%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKT-----CATSLESMLDFAGSIFGSETGFKT---VTTKSTSNTFQNYTILEVQEIP 582
            +FF  +DL  G+KM L+      +  A  LPR  ADS PF+ ++LP IL   SIP  SP A AM  TL +CE   I  E        CATSLESM++   S  G+         V  ++     Q Y +  V+ +P
Sbjct:   66 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVP 199          

HSP 2 Score: 23.8682 bits (50), Expect = 3.789e-13
Identity = 10/16 (62.50%), Postives = 10/16 (62.50%), Query Frame = 3
Query:  579 PCFQMVACHYMSYPYA 626
            P   MVACH M Y YA
Sbjct:  201 PGGDMVACHRMPYAYA 216          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.404e-13
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKT----CATSLESMLDFAGSIFGS 498
            +FF  +DL  G+KM L+      +  A  LPR  A+S PF+ ++LP IL   SIP VSP A AM  TL  CE   +  E       CATSLESM++F  S  G+
Sbjct:   64 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGT 165          

HSP 2 Score: 23.483 bits (49), Expect = 6.404e-13
Identity = 10/16 (62.50%), Postives = 10/16 (62.50%), Query Frame = 3
Query:  579 PCFQMVACHYMSYPYA 626
            P   MVACH M Y YA
Sbjct:  198 PGGDMVACHGMPYAYA 213          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.952e-12
Identity = 45/128 (35.16%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS-ETGFKTVTTKSTSNTFQNYTILEVQEI 579
            +FF    ++VG ++  + P    + +  FLPR+ ADS PF+   LP IL    I   S    +ME TLR CE+  I  E K CATSLE++++ A  + G+ +    T T        Q YT++ VQ +
Sbjct:  141 VFFHEEAVRVGRRLPFHFPPATPA-ALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPV 267          

HSP 2 Score: 20.7866 bits (42), Expect = 3.952e-12
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 3
Query:  594 VACHYMSYPY 623
            VACH  +YPY
Sbjct:  274 VACHDEAYPY 283          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.885e-11
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS 498
            +FF    ++VG ++  Y P    S +  FLPR  ADS PF+   LP +L L  +   + +A  M +TLR CE   +  E K CATSLE++++ A +  G+
Sbjct:  189 VFFHEEAVRVGERLPFYFPAATTS-ALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGT 287          

HSP 2 Score: 21.557 bits (44), Expect = 1.885e-11
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 3
Query:  594 VACHYMSYPY 623
            VACH  +YPY
Sbjct:  321 VACHDQAYPY 330          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 2.466e-11
Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 1
Query:  283 FLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTT----KSTSNTFQNYTI 561
            FLPR EAD+ PFS K L  IL    +   S  A  +++TL  CE    K E K CATSLESM+DF  S  G+    K  +T    K      Q YT+
Sbjct:  134 FLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTR-DIKAASTFLVGKDGDTPAQEYTV 229          

HSP 2 Score: 25.7942 bits (55), Expect = 2.466e-11
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  588 QMVACHYMSYPYA 626
            Q++ACH  SYPYA
Sbjct:  240 QLIACHPESYPYA 252          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.162e-11
Identity = 49/155 (31.61%), Postives = 77/155 (49.68%), Query Frame = 1
Query:  175 DVNSSEVK---IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPI--KDEIKTCATSLESMLDFAGSIFGSE----TGFKTVTTKSTSNTFQNYTILEVQEIPASRW*LVITC 612
            D +  EV    +FF  +DL  G+K+ L+         A  L R  AD+ PF+ ++LP IL   S+P  S  A+ M  TL  CE   +  +D+ K C TSLESM++FA +  G+        + + T +     Q YT+  V+ + +     ++TC
Sbjct:   86 DTDMDEVSTDAVFFLEKDLFPGSKITLHFT--RGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTC 238          

HSP 2 Score: 21.557 bits (44), Expect = 4.162e-11
Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = 3
Query:  591 MVACHYMSYPYA 626
            MV CH M Y YA
Sbjct:  235 MVTCHGMPYAYA 246          
BLAST of DR908103 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.034e-11
Identity = 42/128 (32.81%), Postives = 65/128 (50.78%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS-ETGFKTVTTKSTSNTFQNYTILEVQEI 579
            +FF    ++VG ++    P    + +  FLPR+ ADS PF+   LP +L    +   S    +ME TLR CE+  I  E K CATSLE++++ A  + G+ +    T T        Q YT+  V+ +
Sbjct:  168 VFFHEEAVRVGKRLPFRFPPATPA-ALGFLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPV 294          

HSP 2 Score: 20.7866 bits (42), Expect = 9.034e-11
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 3
Query:  594 VACHYMSYPY 623
            VACH  +YPY
Sbjct:  301 VACHDEAYPY 310          
The following BLAST results are available for this feature:
BLAST of DR908103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BURP6_ORYSJ3.052e-1740.15BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP3_ORYSJ4.137e-1641.35BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPH_ORYSJ5.043e-1433.33BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP2_ORYSJ3.789e-1336.76BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ6.404e-1343.27BURP domain-containing protein 1 OS=Oryza sativa s... [more]
RAF1B_WHEAT3.952e-1235.16Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURPD_ORYSJ1.885e-1137.00BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP5_ORYSJ2.466e-1142.27BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP8_ORYSJ4.162e-1131.61BURP domain-containing protein 8 OS=Oryza sativa s... [more]
RAF1A_WHEAT9.034e-1132.81Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16231 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908103 ID=DR908103; Name=DR908103; organism=Citrus sinensis; type=EST; length=723bp
AAACGAGTTATCCAGAGCAAGATGGGTTTAGGATTAGCTTCTTGGAACAT
CCTTCTACAGCTCCTCCTCCTGTGCGCATACAGAAGCGGTGCCAGGGAAT
TGAGAGAGGAGTCTCTGCCTCAAATGGATGTTCAACTTCATCATATGCAT
ATAGCTCATCATTCATCCCATGTGGACGTAAACTCAAGCGAGGTCAAGAT
ATTCTTCACCTTGAGGGATCTAAAGGTAGGTAATAAAATGGCCCTCTATC
TTCCAATTGAAGATCATTCAAATTCTGCTCACTTTTTGCCTAGAGAAGAA
GCTGATTCCTTTCCATTTTCATTGAAACAACTTCCTTATATTCTTGAATT
AACCTCCATCCCACGCGTCTCACCGCAAGCCAAAGCCATGGAAGACACTC
TCAGGATGTGTGAAACCGATCCCATCAAAGATGAAATCAAAACTTGTGCT
ACCTCTTTAGAATCCATGCTTGATTTTGCTGGCAGCATCTTTGGCTCGGA
GACAGGTTTTAAAACTGTGACCACAAAGTCTACCAGTAATACTTTCCAAA
ATTATACAATCCTAGAGGTGCAAGAGATCCCTGCTTCCAGATGGTAGCTT
GTCATTACATGTCCTATCCTTATGCATTTACGGCTGCATAGCCATATGAC
AGAGACATCAACAAGTATTCAGGGTTTCTCTGGTCGGTGACAATGGAGAT
ATAGCTGACGCTATTTCAGCTTG
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