DR405842

Overview
NameDR405842
Unique NameDR405842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2398 contig Csv1_Contig2398:201..967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CCD94_DICDI (Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.621e-45
Identity = 101/236 (42.80%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    4 KVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQSTAPXXXXXXXXXXXALIRSIFQKPREV-VRRISXXXXXXXXXXFQFASERNEGSSNNLKKRKLSEDVPSKPTDALTEASFSDSTSNGEN 708
            KV  MLPMSIRCNTCG YI +GTKFN++KE    E YLGI+I+RF+ +C KC+AELTIKTDP+NS+Y+ ESGA+RNYEPW+  DE     +  ++ EE  DAM ALENRTL+SKREM++L AL+E+KS+ SR++ +  + +LE                   L++SIF    ++ + +I+              S  N   SN +K+ +  +D   K       + FS++  N +N
Sbjct:   32 KVTTMLPMSIRCNTCGEYIGRGTKFNAKKETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEE-KSNRMTKEQEEEQDAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQELEEKLQDEEDDLLVKSIFNNKNKLELNQINDNN-----------SINNNIDSNKIKRIENDDDDGDK-----FNSLFSNNNKNNKN 250          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CCD94_MOUSE (Coiled-coil domain-containing protein 94 OS=Mus musculus GN=Ccdc94 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHATVSVDAML 429
            VR+M P ++RC TCG YIYKG KFN+RKE    E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++  +  +E     +K R+ EE+ + MK LENRT DSK EM++L  L E+K +  R A V  +AML
Sbjct:   33 VRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAML 173          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CCD94_HUMAN (Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHATVSVDAML 429
            VR+M P ++RC TCG YIYKG KFN+RKE    E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++  +  +E     +K R+ EE+ + MK LENRT DSK EM++L  L E+K +  R A V  +AML
Sbjct:   33 VRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAML 173          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CWF16_SCHPO (Cell cycle control protein cwf16 OS=Schizosaccharomyces pombe GN=cwf16 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.353e-36
Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW---RAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQSTA 450
            VR+M P S+RC+TCG YIYKG KFN+RKE   GE Y  I I RFY +CT+C+AE+T  TDP+++DY  ESGASRNYEPW   R ++   +E  +R D  E  D M+ LE +TLD+KR+M I  ALDE++   +R + V++D  +  L+  A
Sbjct:   38 VRLMTPFSMRCHTCGEYIYKGKKFNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKRLQEYEENELAERNDIPE-EDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAIALLKEDA 186          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CWC16_YEAST (Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16
Identity = 52/148 (35.14%), Postives = 76/148 (51.35%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYL-GIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--------EAVDE-------EKKRRDAEEMG------DAMKALENRTLDSKREMDILAALDEMK 384
            +R+M P S+RC  C  YI K  KFN +KE  + E YL  I+I+R    C +C+  +  +TDP NSDY++E G  RNY P +  D        E++DE       EK+    E+MG      D M  LE R    ++E +    L+ ++
Sbjct:   41 IRLMTPFSMRCLECNEYIPKSRKFNGKKE-LLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRNYVPQKPNDDLNAKTAVESIDETLQRLVREKEMEQNEKMGIKEQADDKMDLLEKRLAKIQQEQEDDEELENLR 187          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CWC16_SCHPO (Protein cwc16 OS=Schizosaccharomyces pombe GN=cwc16 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKRE 351
            +R  +P  + CN C N I +GT+FN+ K++ IG +Y   +I+ F  KC  CS  + + TDP+N++YIV SG  R  EP   +D      K   D +   DA++ALE +    K E
Sbjct:   23 IRFEMPFPVWCNNCENIIQQGTRFNAVKKE-IG-SYYTTKIWSFSLKCHLCSNPIDVHTDPKNTEYIVASGGRRKIEP---QDINERPAKAENDEKVPSDAIEALETQLTQQKSE 132          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CC130_RAT (Coiled-coil domain-containing protein 130 OS=Rattus norvegicus GN=Ccdc130 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDE----------MKSMKSRHATVSVDAMLE 432
            +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGASR  E W  ED  + +  E ++++  E  DAM  LE+   D    K+ +  L+ + E          + SM  RH      AM E
Sbjct:   46 IRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQNAWKDDFALNSMLRRHFREKKKAMQE 199          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CC130_MOUSE (Coiled-coil domain-containing protein 130 OS=Mus musculus GN=Ccdc130 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDE----------MKSMKSRHATVSVDAMLE 432
            +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGASR  E W  ED  + +  E ++++  E  DAM  LE+   D    K+ +  L+ + E          + SM  RH      AM E
Sbjct:   46 IRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQNAWKDDFALNSMLRRHFREKKKAMQE 199          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CC130_BOVIN (Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 387
            +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGA R  E W  ED  + +  E +++   EM DAM  LE+   D    K+ +  L+ + E +S
Sbjct:   46 IRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMEDNEQVLTTEHEKKQKLEM-DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 174          
BLAST of DR405842 vs. ExPASy Swiss-Prot
Match: CC130_DROME (Coiled-coil domain-containing protein 130 homolog OS=Drosophila melanogaster GN=CG15084 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 41/126 (32.54%), Postives = 61/126 (48.41%), Query Frame = 1
Query:    7 VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW-RAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEM 381
            +R  +P +I C+ C N+I  G ++N+ K       Y    +F+F  KC  C     I+TDP N DY++ SGA R    W   ++E V  E K        DAM  LE++  D+K   D    L ++
Sbjct:   45 IRFEMPYNIWCDGCKNHIGMGVRYNAEKTKV--GMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENRWDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVLQKL 168          
The following BLAST results are available for this feature:
BLAST of DR405842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CCD94_DICDI3.621e-4542.80Coiled-coil domain-containing protein 94 homolog O... [more]
CCD94_MOUSE2.969e-3953.19Coiled-coil domain-containing protein 94 OS=Mus mu... [more]
CCD94_HUMAN2.969e-3953.19Coiled-coil domain-containing protein 94 OS=Homo s... [more]
CWF16_SCHPO2.353e-3650.33Cell cycle control protein cwf16 OS=Schizosaccharo... [more]
CWC16_YEAST4.613e-1635.14Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 ... [more]
CWC16_SCHPO1.641e-1337.39Protein cwc16 OS=Schizosaccharomyces pombe GN=cwc1... [more]
CC130_RAT1.814e-1231.85Coiled-coil domain-containing protein 130 OS=Rattu... [more]
CC130_MOUSE1.814e-1231.85Coiled-coil domain-containing protein 130 OS=Mus m... [more]
CC130_BOVIN1.814e-1233.33Coiled-coil domain-containing protein 130 OS=Bos t... [more]
CC130_DROME5.278e-1232.54Coiled-coil domain-containing protein 130 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247N18 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247N18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405842 ID=DR405842; Name=DR405842; organism=Citrus sinensis; type=EST; length=768bp
GGGAAGGTTCGGATGATGTTGCCCATGAGTATCCGATGCAACACCTGTGG
CAATTACATCTACAAAGGGACAAAATTTAATTCTCGCAAAGAAGACGCCA
TTGGCGAGACGTATCTCGGAATTCAAATATTCAGGTTCTATTTCAAATGC
ACAAAGTGCTCAGCTGAGCTGACAATAAAAACAGATCCTCAAAATTCAGA
TTATATAGTGGAGTCTGGTGCATCTCGTAATTATGAACCTTGGCGCGCGG
AGGATGAGGCAGTAGACGAGGAGAAAAAGAGGAGAGATGCTGAAGAGATG
GGGGATGCTATGAAAGCTTTGGAGAATAGAACCTTGGATTCCAAAAGGGA
GATGGACATCCTTGCAGCACTTGATGAGATGAAGTCTATGAAGTCTAGAC
ATGCAACTGTTAGTGTAGATGCTATGCTTGAGGCCTTGCAGAGCACAGCT
CCAGAAAAGGAGAAGAGGCTAGAAGAAGAGGATGAAGCACTTATTAGATC
AATATTCCAGAAACCAAGAGAAGTTGTTCGAAGGATTTCTGATGAAGATC
TCGATGATGATGGTGATTTGTTTCAATTTGCCAGTGAAAGAAATGAAGGC
TCAAGCAATAATTTGAAGAAAAGAAAGCTTTCTGAAGATGTTCCGAGTAA
ACCAACAGATGCATTGACAGAAGCCAGTTTTTCTGACAGCACTAGCAATG
GAGAAAATCCAACAGTTTCAAAAACTGAAAGTGATGCCAAGGTGCCTCGA
AAGTCTTCATCAATCCAG
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