DR405838

Overview
NameDR405838
Unique NameDR405838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:60..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 3.033e-56
Identity = 101/158 (63.92%), Postives = 121/158 (76.58%), Query Frame = 1
Query:  247 GVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVK 720
            GV     DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+GSISGFFSQ              FIEAT+E  +TFL A+FDGI+GLGF+EI+VGDAVPVW  M+ QGLV+
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQ 185          

HSP 2 Score: 27.7202 bits (60), Expect = 3.033e-56
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            L++ L  E VFSFWLNR+
Sbjct:  179 LNQGLVQEPVFSFWLNRN 196          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.297e-55
Identity = 105/176 (59.66%), Postives = 134/176 (76.14%), Query Frame = 1
Query:  196 AARITRKE--RYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+GSI+GFFS+              FIEAT+E  LTF++A+FDGI+GLGF+EI+VGDAVPVW  MVEQGLV
Sbjct:   45 AARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLV 218          

HSP 2 Score: 25.7942 bits (55), Expect = 3.297e-55
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNR 751
            + + L SE VFSFW NR
Sbjct:  213 VEQGLVSEPVFSFWFNR 229          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.043e-53
Identity = 104/217 (47.93%), Postives = 142/217 (65.44%), Query Frame = 1
Query:   67 EQKLLRSVFCLWVLASCLLLPASSNXXXXXXXXXXXXXXHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            ++ LL    CLW L+  LLL ASS+                L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG+ISGFFS+              FIEATRE S+TF++ +FDGI+GLG+ EI+VG A P+W +M EQ L+
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELL 210          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.294e-53
Identity = 95/159 (59.75%), Postives = 122/159 (76.73%), Query Frame = 1
Query:  241 VSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            +SG +    + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+GSI+G+FS+              FIEAT+E  +TFL+A+FDGI+GLGF+EI+VG AVPVW  M+EQGLV
Sbjct:   59 LSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLV 217          

HSP 2 Score: 26.5646 bits (57), Expect = 2.294e-53
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNR 751
            + + L S+ VFSFWLNR
Sbjct:  212 IEQGLVSDPVFSFWLNR 228          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 5.998e-51
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 1
Query:   94 CLWVLASCLLLPASSNXXXXXXXXXXXXXX-HSLNAARITRKERYMGGAGVSGVHHR--LGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVK 720
            CL++L S  ++ ++SN                +  AAR+  K+  +  A     + +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G++SGFFS               FIEATRE SLTFL+A+FDG++GLGF+EIAVG+AVPVW NMVEQGLVK
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVK 223          

HSP 2 Score: 26.1794 bits (56), Expect = 5.998e-51
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  E VFSFWLNR+
Sbjct:  217 VEQGLVKEPVFSFWLNRN 234          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.416e-37
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C+   I+C  H +Y + KS+TY E G    I+YG+GS+SGF SQ              F EA ++  +TF+ A+FDGI+G+ F  I+V    P +DN+++Q L+++
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEK 214          

HSP 2 Score: 23.0978 bits (48), Expect = 6.416e-37
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + +FSF+LNRD
Sbjct:  207 MQQKLIEKNIFSFYLNRD 224          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.088e-36
Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 1
Query:  286 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            +PL  FM+ QYFG IG+G+PPQNF+V+FDTGSSNLWVPS++C +FS++C+FH R+  + S+++   G    I YG+G +SG  SQ              F EA  E SL F LA FDGI+GLGF  +AVG   P  D MVEQGL+++
Sbjct:   63 VPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPTLAVGGVQPPLDAMVEQGLLEK 209          

HSP 2 Score: 23.0978 bits (48), Expect = 1.088e-36
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + VFSF+LNRD
Sbjct:  202 VEQGLLEKPVFSFYLNRD 219          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 78/144 (54.17%), Postives = 96/144 (66.67%), Query Frame = 1
Query:  286 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            +P+ NFM+AQYF EI IG+PPQ F V+ DTGSSNLWVPSS+C  SI+CY H++Y+S +S+TY + G S +I YGSGS+SGF SQ              F EAT E  L F   RFDGI+GLG+  IAV    P +  MVEQ LV
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLV 217          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.082e-36
Identity = 73/154 (47.40%), Postives = 105/154 (68.18%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV++
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEK 224          

HSP 2 Score: 23.0978 bits (48), Expect = 4.082e-36
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + +FSF+LNRD
Sbjct:  217 MQQKLVEKNIFSFYLNRD 234          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 5.321e-36
Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 1
Query:  289 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            PL N++DAQY+G I IG+PPQ+F V+FDTGSSNLWVPS +C F+ I+C  H++Y ++KS+T+ + G +  I YGSGS+SG+ S               F EA  E  L F+ A+FDGI+GLG+  I+V   VPV+ NM  QGL+
Sbjct:   59 PLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLI 202          

HSP 2 Score: 22.3274 bits (46), Expect = 5.321e-36
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  704 SRALXSEEVFSFWLNRD 754
            ++ L    VFSF+LNRD
Sbjct:  198 NQGLIDAPVFSFYLNRD 214          
The following BLAST results are available for this feature:
BLAST of DR405838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYPR1_CYNCA3.033e-5663.92Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR1_ORYSJ3.297e-5559.66Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPRX_ORYSJ2.043e-5347.93Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR_HORVU2.294e-5359.75Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR_CUCPE5.998e-5150.23Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CATD_CHICK6.416e-3748.97Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
NAPSA_MOUSE1.088e-3650.34Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]
CARP_NEUCR1.331e-3654.17Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CATD_CANFA4.082e-3647.40Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
ASPP_AEDAE5.321e-3649.31Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247N14 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247N14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405838 ID=DR405838; Name=DR405838; organism=Citrus sinensis; type=EST; length=754bp
GGGGACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGAAA
ACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTAT
GGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGG
AGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCTGC
AAGAATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCG
TGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAAC
TTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACA
AAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCAT
CTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAG
TCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAA
CTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAG
TTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAA
GGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGG
GTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGG
TTGAGCAGGGCCTTGTNAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAG
GGAT
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