DR405783

Overview
NameDR405783
Unique NameDR405783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_CITSI (ATP synthase subunit a, chloroplastic OS=Citrus sinensis GN=atpI PE=3 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.734e-114
Identity = 208/226 (92.04%), Postives = 208/226 (92.04%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_GOSHI (ATP synthase subunit a, chloroplastic OS=Gossypium hirsutum GN=atpI PE=3 SV=1)

HSP 1 Score: 401.364 bits (1030), Expect = 2.344e-111
Identity = 201/226 (88.94%), Postives = 205/226 (90.71%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQI GFQVHAQVLITSWVVIAILLGSA IAVRNPQT+PTA QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   10 GLYDISGVEVGQHFYWQIAGFQVHAQVLITSWVVIAILLGSAVIAVRNPQTIPTAGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 235
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_MANES (ATP synthase subunit a, chloroplastic OS=Manihot esculenta GN=atpI PE=3 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 6.821e-111
Identity = 199/226 (88.05%), Postives = 205/226 (90.71%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYW+IGGFQVHAQVLITSWVVIAILLGSA +AVRNPQT+PT  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNW+GALLPWKII+LPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYDISGVEVGQHFYWKIGGFQVHAQVLITSWVVIAILLGSAIVAVRNPQTIPTGGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWAGALLPWKIIQLPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_GOSBA (ATP synthase subunit a, chloroplastic OS=Gossypium barbadense GN=atpI PE=3 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.163e-110
Identity = 200/226 (88.50%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQI GFQVHAQVLITSWVVIAILLGSA IAVRNPQT+PTA QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLF SGIQALIFATLAAAY
Sbjct:   10 GLYDISGVEVGQHFYWQIAGFQVHAQVLITSWVVIAILLGSAVIAVRNPQTIPTAGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFISGIQALIFATLAAAY 235
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OENPA (ATP synthase subunit a, chloroplastic OS=Oenothera parviflora GN=atpI PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+P  +QNFFEY+LEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK++ELPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OENGL (ATP synthase subunit a, chloroplastic OS=Oenothera glazioviana GN=atpI PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+P  +QNFFEY+LEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK++ELPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OENEH (ATP synthase subunit a, chloroplastic OS=Oenothera elata subsp. hookeri GN=atpI PE=3 SV=2)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+P  +QNFFEY+LEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK++ELPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OENBI (ATP synthase subunit a, chloroplastic OS=Oenothera biennis GN=atpI PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+P  +QNFFEY+LEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK++ELPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OENAR (ATP synthase subunit a, chloroplastic OS=Oenothera argillicola GN=atpI PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+P  +QNFFEY+LEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK++ELPHGELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_CARPA (ATP synthase subunit a, chloroplastic OS=Carica papaya GN=atpI PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.985e-110
Identity = 199/226 (88.05%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQH YWQIGG QVHAQVLITSWVVIAILLGSA IAVRNPQT+PTA QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGL+KKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHLYWQIGGLQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTAGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 238
The following BLAST results are available for this feature:
BLAST of DR405783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
ATPI_CITSI1.734e-11492.04ATP synthase subunit a, chloroplastic OS=Citrus si... [more]
ATPI_GOSHI2.344e-11188.94ATP synthase subunit a, chloroplastic OS=Gossypium... [more]
ATPI_MANES6.821e-11188.05ATP synthase subunit a, chloroplastic OS=Manihot e... [more]
ATPI_GOSBA1.163e-11088.50ATP synthase subunit a, chloroplastic OS=Gossypium... [more]
ATPI_OENPA1.985e-11087.17ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENGL1.985e-11087.17ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENEH1.985e-11087.17ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENBI1.985e-11087.17ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENAR1.985e-11087.17ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_CARPA1.985e-11088.05ATP synthase subunit a, chloroplastic OS=Carica pa... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247K04 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247K04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405783 ID=DR405783; Name=DR405783; organism=Citrus sinensis; type=EST; length=684bp
GGGGGGGGTTATACGATATATCCGGTGTGGAAGTAGGCCAACATTTCTAT
TGGCAAATAGGTGGGTTCCAGGTCCATGCCCAAGTACTTATTACTTCTTG
GGTTGTAATTGCTATCTTATTAGGTTCAGCCTTTATAGCCGTTCGGAATC
CACAAACCGTTCCGACTGCCACTCAAAATTTCTTCGAATATGTCCTTGAA
TTCATTCGAGACGTGAGCAAAACTCAGATTGGAGAAGAATATGGCCCATG
GGTTCCCTTTATTGGAACTCTGTTTCTTTTTATTTTTGTTTCTAATTGGT
CAGGTGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGGGAGTTA
GCCGCACCCACGAATGATATAAATACTACCGTTGCTTTAGCTTTGCTCAC
GTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAGGCTATT
TCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAACATTTTA
GAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGGGAATAT
ATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAG
TGGTTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGTATTCAA
GCTCTTATTTTTGCAACTTTAGCTGCGGCTTATA
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