DR405770

Overview
NameDR405770
Unique NameDR405770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1188 contig Csv1_Contig1188:580..1227. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 4.984e-52
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            YYGRGPIQ++WN NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG   +  V++RIGF+  +C  FGI  GDNLDC +QRP+G +L   S+
Sbjct:  176 YYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  189 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 88/141 (62.41%), Postives = 110/141 (78.01%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  184 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PG+NLDC NQR +G  L+   M
Sbjct:  182 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 90/141 (63.83%), Postives = 105/141 (74.47%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGP+QLTWN NY +CG A+GVDLLNNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII  W PS +D  AGR+PG+GL TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQR Y       SM
Sbjct:  181 YFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.399e-51
Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  +M
Sbjct:  178 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 85/141 (60.28%), Postives = 109/141 (77.30%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  176 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  178 YFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 87/141 (61.70%), Postives = 107/141 (75.89%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 427
            Y+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR+PGYG+ TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQ P+G  +   SM
Sbjct:  184 YFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324          
BLAST of DR405770 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 86/133 (64.66%), Postives = 105/133 (78.95%), Query Frame = 2
Query:    5 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 403
            YYGRGP+QL+WN NY  CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRLPGYG+ TN++NGG+ECG   N  V +R+GFF  +CG  G+  G+NLDC NQRP+G
Sbjct:  111 YYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
The following BLAST results are available for this feature:
BLAST of DR405770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI2_PEA4.984e-5264.54Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI1_TOBAC1.110e-5163.12Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI2_TOBAC4.219e-5162.41Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHIC_SOLLC5.510e-5161.70Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI1_THECC5.510e-5163.83Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI1_SOLTU9.399e-5161.70Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_SOLTU1.603e-5060.28Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_SOLTU2.094e-5060.99Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_GOSHI2.094e-5061.70Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIT_CARPA3.571e-5064.66Endochitinase OS=Carica papaya PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247J10 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247J10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405770 ID=DR405770; Name=DR405770; organism=Citrus sinensis; type=EST; length=648bp
GGGGTACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACT
TAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAACAATCCAGACCTA
CTTGCCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGAT
GACTGCACAGCCACCAAAGCCGTCGTGCCACGAAGTCATTATCGACGAAT
GGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATACGGT
CTAACCACAAATATAATCAACGGTGGAATTGAATGTGGCTACGTTGGGAA
TGACGCTGTACGTAACCGTATTGGGTTCTTTACCACTTTCTGTGGCAAGT
TTGGGATTCAGCCTGGTGACAATCTTGATTGCTCCAACCAACGGCCTTAT
GGCCTTAATCTGATGGCACAATCTATGTGATCATCATGATCAACGTTTTA
GTAAAATAAGCTTAATAAAAGCTACTTAATAAAAACTTTAGATGTCACAC
TTGTAGGTGGACAACTAAACTGTTACGCTCTTATTGTAAGTAAATTAAAT
AAGACTGATCCAACATGGATCAATGAGTCTTCTCCNAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAANNNTAAAAAAAAAAAAAAAAAAAAAAAA
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