DR405296

Overview
NameDR405296
Unique NameDR405296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53
Identity = 99/103 (96.12%), Postives = 103/103 (100.00%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 312
            AKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  290 AKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.905e-53
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  291 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.489e-53
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARRCIVQVSYAIGVP+PLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  290 AKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKPQS 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.544e-53
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  290 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.241e-53
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK QA
Sbjct:  290 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.457e-53
Identity = 96/104 (92.31%), Postives = 102/104 (98.08%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTG+IPDKEIL IVKE+FDFRPGM+TINLDLKRGGNGRFLKTA YGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  290 AKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKPQS 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  290 AKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  290 AKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  290 AKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.613e-52
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 306
            AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  290 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
The following BLAST results are available for this feature:
BLAST of DR405296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLTU1.459e-5396.12S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_MEDTR1.905e-5395.19S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ELAUM2.489e-5394.23S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_POPTR5.544e-5397.12S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_VITVI7.241e-5394.23S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ELAUM9.457e-5392.31S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_BRARP1.235e-5293.27S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU1.235e-5293.27S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU1.235e-5293.27S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK5_VITVI1.613e-5297.03S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242A07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405296 ID=DR405296; Name=DR405296; organism=Citrus sinensis; type=EST; length=629bp
GGGGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCA
AGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACT
CATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAG
GAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAA
AAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTG
GCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGG
GAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCT
GTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTT
GCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACA
TGTTCCCCATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTG
GTTTTGGTTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTG
AGAATTTTGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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