DR405294

Overview
NameDR405294
Unique NameDR405294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.153e-116
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 3
Query:   54 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALLN 698
            MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFR VVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSE VLESMIGKNGVSPAAKKSLAERLSALLN
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 215          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.274e-87
Identity = 167/216 (77.31%), Postives = 184/216 (85.19%), Query Frame = 3
Query:   54 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALLN 698
            M+ S SVTELQVEN TF P+V+PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLED AV  L  KWKGK+A ELTESVEFFR VVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF EVFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIE+ LL+  VLES+IGKNGVSPAAK+SLA RLS L N
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.243e-86
Identity = 160/218 (73.39%), Postives = 187/218 (85.78%), Query Frame = 3
Query:   45 LSPMNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALL 695
            +SP + SPSV ++Q+E+  F P+V+PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLED A+P LA KWKGKTAEELT+SV+FFR +V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF EVFKDE FPPG SILFTQSP GSLTI+FSKDGS+P+ G  V+E+  LSE VLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    1 MSP-SQSPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.624e-86
Identity = 163/216 (75.46%), Postives = 184/216 (85.19%), Query Frame = 3
Query:   54 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALLN 698
            M P PS+  LQVE   F PSV+PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLED+AVPLLA KWKGKTAEEL+ESVEFFR +VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKD S+P+   AVIE+ LLSE VLES++GK+GVSPAAK+SLA RLS LLN
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.121e-86
Identity = 163/214 (76.17%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   54 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSAL 692
            M+P PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE  AVP LA KWKGKT EEL +SV+FFR VVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+E VLES+IGK+GVSP AKKSLA RLS L
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.375e-85
Identity = 162/214 (75.70%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   54 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSAL 692
            M+  PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE+ AVP LA KWKGKT EEL +SV+FFR VVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+E VLES+IGK+GVSP AKKSLA RLS L
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.345e-85
Identity = 162/210 (77.14%), Postives = 181/210 (86.19%), Query Frame = 3
Query:   69 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALL 695
            SVT +Q+  ++F PSV+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP LA KWKGKTAEELTESVEFFR +VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKDG IP+ G AVIE+ LLSE VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 9.853e-84
Identity = 156/211 (73.93%), Postives = 183/211 (86.73%), Query Frame = 3
Query:   69 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALLN 698
            SVTE+QVE+V F P V+PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLED+AVP LA KWKGK+A+ELTESVEFFR +VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF E+FKD+ FPP +S LFTQSP GSLT+SFSKDGSIP+ G AV+E+ LLSE VLES+IGK+GVSP AK++LA RL  LLN
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLN 217          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 9.853e-84
Identity = 159/210 (75.71%), Postives = 179/210 (85.24%), Query Frame = 3
Query:   69 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSALL 695
            SVT +Q+   +F P+V+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP L+ KWKGKTAEELTESVEFFR +VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSL I  SKDGSIP+ G AVIE+ LLSE VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of DR405294 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.577e-81
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 3
Query:   66 PSVTELQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRGVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEVVLESMIGKNGVSPAAKKSLAERLSAL 692
            PSVT LQVENV F P+ ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFR +VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSE VLESMIG +GVSPAAK+SLA RLS L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of DR405294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.153e-11699.07Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI4.274e-8777.31Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_CAMSI1.243e-8673.39Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_PYRCO1.624e-8675.46Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_VITVI2.121e-8676.17Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI1.375e-8575.70Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI1_FRAAN2.345e-8577.14Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM9.853e-8473.93Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN9.853e-8475.71Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA4.577e-8173.46Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242A05 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405294 ID=DR405294; Name=DR405294; organism=Citrus sinensis; type=EST; length=704bp
GGGGACCAATAAAAAAAAACACACACTGAAATTAATCAAAAAGGCTGTCA
CCGATGAATCCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCAC
TTTCACGCCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCG
GCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTC
ACGGCGATAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGG
CAAATGGAAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCT
TCAGAGGCGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATG
ATCTTGCCATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTG
CATTGCCATATGGAAATTTTTTGGAATTTACACTGATGCTGAAGCCAAAG
CTATTGAAAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGA
TCCTCAATTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTC
CAAGGACGGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATC
TGCTTTCTGAGGTAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCT
CCTGCAGCAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGN
NNCT
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