DR405290

Overview
NameDR405290
Unique NameDR405290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length358
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR405290 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.263e-14
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  140 MLNFGRAXXXXXXXXXXSFGGLDYADPKRKSNFAGRFILAAALTALCIFLLKQXXXXXXXXXXXQHEEGVTHV 358
            M +FGRA          S GGLDYADPK+K+N+ G+ +L A+LTALCIF+LKQ           +HE GVTHV
Sbjct:    1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHV 73
The following BLAST results are available for this feature:
BLAST of DR405290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARAE1_ARATH3.263e-1450.68UDP-arabinose 4-epimerase 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242A01 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405290 ID=DR405290; Name=DR405290; organism=Citrus sinensis; type=EST; length=358bp
GGGGATTTTCATTCATTTCTCTTCACATTGCTCTCTTCCCTTTTCGCGCT
CNNNCAAGGGGGTGTATTATACTTGATTTCTGACATAACTGAGGCTTACA
ATTGATTGCAACATAGATAAACAATCAGAATCTGCCGAGATGCTGAATTT
TGGCAGGGCCAGAACTCAGCAAAGGCAGACTAGACCTACGTCCTTTGGAG
GTTTGGATTATGCAGACCCCAAAAGGAAGAGCAATTTTGCTGGAAGATTT
ATTTTGGCTGCTGCTCTTACTGCATTGTGCATTTTCCTGCTGAAGCAATC
TCCAACTTTCAGTAGCCCAAGCCCGTTTTCCCAACATGAAGAAGGGGTAA
CTCATGTC
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