DR405262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62 Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 1 Query: 160 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLK 555 MPS+EDELFPSTPGKFKI+RSN RQ HRCF STSTMFLWALFL+ALTASYLSFQSFVDSGSRY +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+K GDGVVGLDNFNNYYDPSLK Sbjct: 1 MPSIEDELFPSTPGKFKIDRSN---RQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLK 129
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.248e-26 Identity = 67/140 (47.86%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 160 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYL--------SFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLK 555 M L+D PSTPGK+K ++ H + S + LWA +AL YL S ++ DS S +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++ GDGV+GLDNFN YYDP LK Sbjct: 1 MSHLDD--LPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDSSS-ISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLK 137
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.248e-26 Identity = 82/183 (44.81%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 160 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTAS--YLSFQSFVDSGSRYFSA-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLKN----VIEMPG----NGD-------------VPFTHANISSAQKEFGY 636 M L+D PSTPGKFK+ + R +S + + W+L L Y S S DS R SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+ GDGV+GLDNFN+YYD SLK ++E G GD VPFTH +AQ Y Sbjct: 1 MSHLDD--IPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRY 181
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.743e-26 Identity = 84/188 (44.68%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 160 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCF--TSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSA------SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLKN----VIEMPG----NGD-------------VPFTHANISSAQKEFGY 636 M L+D PSTPGKFK FHR +S + + W+L V L + ++S V S S SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+ GDGV+GLDNFN+YYDPSLK ++E G GD VPFTH +AQ Y Sbjct: 4 MSHLDD--IPSTPGKFK--------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRSPVSSNPADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRY 180
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.944e-25 Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 160 MPSLEDELFPSTPGKFKIERSNTMNR-QFHRCFTSTSTMFLWALFLVAL----TASYLSFQSFVDSGSRYFSAS-WGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLK 555 M L+D PS+PGKFK+E+S+ ++R +F T + + L L++L + ++ S D R + +GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+ GDGV+GLDNFN+YYDPSLK Sbjct: 1 MSRLDD--IPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLK 138
BLAST of DR405262 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.181e-22 Identity = 64/140 (45.71%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 208 KIERSNTMNRQFH--RCFTSTSTMFLWALFLVALT-------------------ASYLSFQSFVDSG---SRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKHGDGVVGLDNFNNYYDPSLK 555 K+ER N+ R+ H + ++S + A LVAL A +L +SF+ +G S S+S GG WEK VR S+ R G+SVLVTGAAGFVG+H SLAL+K GDGV+G DNFN+YYDPSLK Sbjct: 14 KLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSDSRAAAAHHLHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLK 153 The following BLAST results are available for this feature:
BLAST of DR405262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405262 ID=DR405262; Name=DR405262; organism=Citrus sinensis; type=EST; length=649bpback to top |