DR405242

Overview
NameDR405242
Unique NameDR405242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4121 contig Csv1_Contig4121:50..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DR405242 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16
Identity = 47/94 (50.00%), Postives = 55/94 (58.51%), Query Frame = 3 
Query:  396 LNLDAAFEQKNEIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNXXXXXXXXXXXXXXXXXXXXXLQIXXAEGEAEAKYLSGLGIAR 677
            +NLD  FEQK E+AK+V EELEK M  YGY I   L+VDI PD  V+RAMN                     LQ+  AE EAEAKYL G+G+AR
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVAR 94
The following BLAST results are available for this feature:
BLAST of DR405242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.256e-1650.00Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240N12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240N12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405242 ID=DR405242; Name=DR405242; organism=Citrus sinensis; type=EST; length=677bp
GGGGAAGCCACATTTGTTTCTTGTTTCAAAAGCAACTCTTTTGCAGGTTG
CAGTTTTGAAAGATGGGTCAAACGTTGGGCTGCATTCAGGTGGAGCAGTC
AAAAGTAGTCATCAGAGAACAATTTGGAAAGTTTGATCATGTGCTTGAAC
CTGGGTGTCAATGCTTGCCTTGGTGCCTTGGCTACAAGGTAGCTGGTCGG
CTTTCACTCCGGGTGCAACAACTGGATGTTAAATGTGAAACAAAGACTAA
GGATAATGTTTTTGTCAATGTGGTTGCTTCCGTTCAATATCGTGCCTTGG
CTGATAAAGCTTATGATGCTTTCTATAAGCTCTCCAACACCAGGGGCCAA
ATCCAAGCCTATGTCTTTGATGTTATCAGGGCAAGCGTACCAAAACTGAA
CTTAGATGCCGCCTTTGAGCAGAAGAATGAAATTGCCAAAGCCGTTGAAG
AGGAGCTCGAAAAGGCCATGTCTCATTATGGGTATGAGATAGTGCAGACT
CTTATTGTGGATATTGAGCCAGATGTTCATGTAAAGAGAGCAATGAATGA
GATCAATGCAGCTGCAAGACTGAGGCTGGCAGCAAATGAGAAGGCTGAGG
CAGAGAAGATATTGCAAATCANNNGAGCTGAAGGGGAGGCTGAGGCAAAA
TACCTGTCCGGACTTGGGATAGCACGT
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