DR405196

Overview
NameDR405196
Unique NameDR405196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:168..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.266e-57
Identity = 103/135 (76.30%), Postives = 117/135 (86.67%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GE+I RFEKK F+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:   14 QRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:   14 QRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.611e-56
Identity = 104/135 (77.04%), Postives = 114/135 (84.44%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:   14 QSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.372e-55
Identity = 103/135 (76.30%), Postives = 115/135 (85.19%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   14 QRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55
Identity = 102/135 (75.56%), Postives = 112/135 (82.96%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:   14 QRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55
Identity = 104/135 (77.04%), Postives = 113/135 (83.70%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK F LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:   15 QRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 101/135 (74.81%), Postives = 114/135 (84.44%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK F+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:   14 QRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/135 (75.56%), Postives = 115/135 (85.19%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   14 QRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.895e-55
Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:   14 QRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148
[Close]
BLAST of DR405196 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.835e-54
Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 2 
Query:    5 KEALSGEIIIRFEKKXFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 409
            +  L GEII RFEKK FSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP +SA GTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH  IYE
Sbjct:   10 QRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGRNVIHGSDAVESARKEIALWFPEGIAEWQSSLHSCIYE 144
The following BLAST results are available for this feature:
BLAST of DR405196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH3.266e-5776.30Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI1.621e-5677.04Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDKA_FLABI3.611e-5677.04Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_TOBAC1.372e-5576.30Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK1_MESCR2.341e-5575.56Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK1_SOYBN3.057e-5577.04Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK_HELAN3.993e-5574.81Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN5.215e-5575.56Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL8.895e-5574.07Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK_SOLLC9.835e-5475.56Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240L07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240L07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405196 ID=DR405196; Name=DR405196; organism=Citrus sinensis; type=EST; length=678bp
GGGCAAAGAGGCCTTGTCTGGTGAAATCATCATCAGATTTGAGAAGAAGG
NNTTCTCCTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGCT
GAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGTTCTCTGAT
TGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGAGGGTGAAG
GTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCAG
TCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTGACGGGCAGGAA
TATCATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAAATCGCCT
TGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCACCCTTGG
ATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTCCTGCAGT
TAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTTACTCCTT
GTTGGTGAACTGTTATGAAGCATTGAGTTAAATTGAGACCAATCCTGGTT
ATGTTGGCTGCTTTCATTCTTGTGGTTGCCATATACAATATTTAAGCTTT
TTTGTTGACTGTATTATGANNTGAGTTTGTTAATGGTTAGCACATGATGG
TTGCACTTTTTATGTAAAAAAAAAAAAA
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