DR405161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: CT004_MACFA (Uncharacterized protein C20orf4 homolog OS=Macaca fascicularis GN=QtsA-15573 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18 Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 83 KMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSR-DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYITKS 496 +MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMI PG+HF++YSS + + KE P +GFF+ + V +W E D+ LGPY + +W L+++I+++ Sbjct: 5 QMDPELAKRLFFEGATVVILNMPKGTEFGIDCNSWEVGPKFRGVKMIPPGIHFLYYSSVDKANPKEVGPRMGFFLSLYQRGLTVLRWSTLREEVDLSPAPESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFISEA 143
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: CT004_BOVIN (Uncharacterized protein C20orf4 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 83 KMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSR-DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYITKS 496 +MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMI PG+HF+ YSS + + +E P +GFF++ + V +WD E D+ LGPY + +W L+++I+++ Sbjct: 5 QMDPELARRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDKANPREVGPRMGFFLNLQQRGLKVLRWDAAREEVDLSPAPEAEVEAMRANLQELDQFLGPYPYTTLKKWISLTNFISEA 143
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: CT004_MOUSE (Uncharacterized protein C20orf4 homolog OS=Mus musculus PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17 Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = 2 Query: 83 KMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSR-DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYITKS 496 +MDPE A +L GAT+++L++P+ T FGID + VGP F+G+KMI PG+HF++YSS + + +E P +GFF+ + V +W+ + D+ LGPY + +W L+++I+++ Sbjct: 5 QMDPELAKQLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLYYSSVDKANPREVGPRMGFFLSLKQRGLTVLRWNAVQEEVDLSPAPEAEVEAMRANLPDLDQFLGPYPYATLKKWISLTNFISEA 143
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: CT004_HUMAN (Uncharacterized protein C20orf4 OS=Homo sapiens GN=C20orf4 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 83 KMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSR-DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYITKS 496 +MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMI PG+HF+ YSS + + KE P +GFF+ + V +W E D+ LGPY + +W L+++I+++ Sbjct: 5 QMDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDKANPKEVGPRMGFFLSLHQRGLTVLRWSTLREEVDLSPAPESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFISEA 143
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: CT004_PONAB (Uncharacterized protein C20orf4 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 83 KMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSR-DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYITKS 496 +MDPE A L GAT+++L++P+ T FGID + VGP F+G+K I PG+HF+ YSS + + KE P +GFF+ + V +W E D+ LGPY + +W L+++I+++ Sbjct: 5 QMDPELAKRLFFEGATVVILNMPRGTEFGIDYNSWEVGPKFRGVKTIPPGIHFLHYSSVDKANPKEVGPRMGFFLSLHQRGLTVLRWSTLREEVDLSPAPESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFISEA 143
BLAST of DR405161 vs. ExPASy Swiss-Prot
Match: YQQ2_CAEEL (Uncharacterized protein F10B5.2 OS=Caenorhabditis elegans GN=F10B5.2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14 Identity = 46/138 (33.33%), Postives = 65/138 (47.10%), Query Frame = 2 Query: 77 GEKMDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIHPGVHFVFYSSSSRDGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGEWKRLSSYIT 490 G + PE + ++GA LL L PQ + FGID + + G F G+KMI PGVHFV+ S S +P IGFF + E++V+KW+ + + D L PY Y W L+ +IT Sbjct: 2 GGALPPEIVDYMYRNGAFLLFLGFPQASEFGIDYKSWKTGEKFMGLKMIPPGVHFVYCSIKS------APRIGFFHNFKAGEILVKKWNTESETFEDEEVPTDQISEKKRQLKNMDSSLAPYPYENYRSWYGLTDFIT 133 The following BLAST results are available for this feature:
BLAST of DR405161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405161 ID=DR405161; Name=DR405161; organism=Citrus sinensis; type=EST; length=634bpback to top |