DR405156

Overview
NameDR405156
Unique NameDR405156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10620 contig Csv1_Contig10620:2..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 70/183 (38.25%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  153 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 701
            +L G+V               +LF K+GA+VV+AD+QD LG +L  +LG     Y+HCDV+NE +V   VD  VA+FGKLD++ N    +       + +  K D E +LAVN +G FL  KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  +  A ELGR+G
Sbjct:   14 KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFN-NAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTENAAGELGRHG 188          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20
Identity = 71/189 (37.57%), Postives = 95/189 (50.26%), Query Frame = 3
Query:  147 SIRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKL----GNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 701
            S RL G+V               +LFHK+GAKV I D+QD+LG  +   L      +   +IH DV  E ++ N VD  V  FG LDIL+N    L       I +   S+ E    VN  G FL  KHAARVM+P ++G I+     G      + G    P +Y G SK  +LGL + +AAELG++G
Sbjct:   15 SQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVG----GVVGGVG--PHSYVG-SKHAVLGLTRSVAAELGQHG 195          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 69/186 (37.10%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  153 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDILVNTGCNL--EYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 701
            RL G+V               +LF K+GA+VVIAD+ D  G+ALA  LG Q V ++ CDVS E +V   VD  +++  G+LD+  N    L  + R   SIL    ++ + +L VN +G  L  KHAAR M PRR G I+        + A + G   +  + Y  SK  I+GL K  A EL  +G
Sbjct:   52 RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIV-----SVASVAAVLG--GLGPHAYTASKHAIVGLTKNAACELRAHG 229          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 3
Query:  156 LQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIP-ANYYGVSKFGILGLVKGLAAELGRY 698
            L+G+V               QLF +NG KVVIA++ +  G    + L  +  DV ++  DV++E  V N+V  TV  +G +D+LVN    +  +   SI + P  + E ++ VN  G ++ +++ A  M+ R  G I+    T          F + P    Y  SK G++ L   LA  L RY
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK---SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIAST--------RAFQSEPDTEPYSASKGGLVALTHSLAVSLSRY 174          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRY 698
            Q F    A VV+AD+ +  G+A+  K  N  + ++H D+++E    N + + V KFG LD+L+N   N        I +   S+   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L + +A +  ++
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQLTRSMAVDYAKH 173          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRY 698
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D+++E    + V++ V  FG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L K +A +  ++
Sbjct:   23 QAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVG-----GLVAWPDIPA--YNASKGGVLQLTKSMAVDYAKH 173          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGIL 659
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D++NE    N + + V KFG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVL 160          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 56/187 (29.95%), Postives = 86/187 (45.99%), Query Frame = 3
Query:  150 IRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPAN-YYGVSKFGILGLVKGLAAELGRYG 701
            +  QG+V                +F + GAKV I D+ +  G+   + + +   +  +I  DV+ + E I  V  TV  FG+LDILVN    + Y    +I +T + D +  +AVN  G FL++K+A   M  +  G I+  +           G   IP    Y VSK  +LGL + LA +   YG
Sbjct:    1 MNFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQI--VKKTVETFGRLDILVNNAGIVPYG---NIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEA--------GLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYG 174          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 58/190 (30.53%), Postives = 82/190 (43.16%), Query Frame = 3
Query:  144 LSIRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 701
            +S RL G+V               +     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  G
Sbjct:    1 MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSG 175          
BLAST of DR405156 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 58/190 (30.53%), Postives = 82/190 (43.16%), Query Frame = 3
Query:  144 LSIRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 701
            +S RL G+V               +     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  G
Sbjct:    1 MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSG 175          
The following BLAST results are available for this feature:
BLAST of DR405156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MOMAS_ORYSJ2.212e-2738.25Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH2.006e-2037.57Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE5.836e-2037.10Sex determination protein tasselseed-2 OS=Zea mays... [more]
Y019_THEMA1.259e-1429.89Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
BACC2_BACSU6.249e-1431.06Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU5.290e-1331.06Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACAM3.429e-1233.11Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y325_THEMA4.479e-1229.95Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
HSD_MYCTU2.903e-1130.533-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO2.903e-1130.533-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240J04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240J04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405156 ID=DR405156; Name=DR405156; organism=Citrus sinensis; type=EST; length=701bp
GGGAATCACACTGCCAAGAGAAGGAAATAATCACAAGCCAAACCTTGTAT
TTTAACAATCTTGATTGAGTTTCAGGTTTTTGAGGAAATTTTTTCACACA
GGCTTGTAGTACTACTGCAGCAGCACCCTGCGAAAGGTGTCAACTCAGCA
TTCGGTTACAAGGCAGAGTGGCAATCATTACTGGCGGAGCAAGCGGGATC
GGAGCATCTGCGGCTCAGCTTTTCCACAAAAATGGAGCCAAAGTTGTCAT
AGCCGATGTGCAAGATAATCTTGGCCAAGCCCTAGCCGATAAGCTAGGCA
ACCAGGATGTCTGCTACATCCATTGTGATGTATCAAATGAAAGGGAAGTC
ATCAATCTTGTTGATACCACCGTTGCTAAATTCGGAAAGCTCGACATCCT
GGTCAATACCGGATGCAATCTTGAGTATCGTGGTTTCGTGAGCATTTTGG
ACACCCCAAAGTCTGATCTAGAACATTTACTGGCTGTGAACACAATTGGT
GGTTTCTTAGTAGCCAAGCATGCTGCAAGAGTCATGGTGCCACGCCGCAG
AGGTTGCATATTGTATACAACGGGTACGGGCACTACTGCTTGTGCGGAAA
TTGAAGGTTTCTGCAATATTCCAGCTAATTATTATGGAGTGTCAAAATTT
GGTATCTTGGGACTTGTCAAGGGCTTAGCGGCAGAGCTTGGACGGTATGG
A
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