DR405022

Overview
NameDR405022
Unique NameDR405022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405022 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:  337 AQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIV 447
            AQRSVPAPFL KTYQLVDD STDDV+SWNE G  F+V
Sbjct:    7 AQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVV 43
[Close]
BLAST of DR405022 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:  334 MAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIV 447
            M+QR+ PAPFL+KTYQLVDD +TDDVISWNE G TF+V
Sbjct:    1 MSQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVV 38
The following BLAST results are available for this feature:
BLAST of DR405022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HSFB1_ARATH5.162e-1181.08Heat stress transcription factor B-1 OS=Arabidopsi... [more]
HSF24_SOLPE5.162e-1176.32Heat shock factor protein HSF24 OS=Solanum peruvia... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240C07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405022 ID=DR405022; Name=DR405022; organism=Citrus sinensis; type=EST; length=490bp
GGGGGAGAACGTTTCGANNNTTTTTCAGAGAAGTTATGGTCTTTGCTCAT
CTAGCCGAAGGACTGGTTAGATTGGCGATTGCTCATGGAAGCACATAGGA
GCAAACGTAGTGGCAATATTTTTCTTTCTGGGTTTTATTGCTGGGGCTGG
GAATTCTTGACTGCCCTCTTGCTCTTTAGTTGCTCCGTCTAGACCCCAAA
AATATATTCATCTCACAAATTAAAGTAGTAGGTGTTAGAGGGTTTCGATA
TTTTCATTCAAGTGTAATTATTTTTGTTTTTCTCAAAAAGGGTAGTGATT
TTGGGGGGTTGGTGAGGGGCAAATCGGGAAAGAATGGCGCAGAGGTCGGT
TCCGGCGCCGTTCCTGATGAAGACGTACCAGTTGGTGGATGATCCGAGCA
CTGATGATGTGATATCGTGGAATGAAAGTGGCGCCACTTTTATTGTCTCG
GAAAACTGCTGATTTTGCTCCAGGATCTGCTGCCTAATTA
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