DR404605

Overview
NameDR404605
Unique NameDR404605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6215 contig Csv1_Contig6215:1..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_DICDI (Fumarylacetoacetate hydrolase domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.219e-69
Identity = 132/212 (62.26%), Postives = 158/212 (74.53%), Query Frame = 2
Query:  131 VQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL-LDVNFDI 760
            + K  + G KIVAVGRNYA HAKELGN +P EP  FLKPTSSYL  G G IE+P     +HHEVEL +VIG+K RD+   +AMDYV GY +ALDMT+R+ QS AK+  LPWTV+KG DTF PIS  +PK  + D +N+ELW  VDG+I+QKG+T  MIF +P+LI +ISSIMTL  GD+ILTGTP GVGPVK GQ I  GITGL  D+ FDI
Sbjct:    1 MNKFWETGRKIVAVGRNYAQHAKELGNEIPSEPFFFLKPTSSYLLQGTGPIEIPLESSDIHHEVELGIVIGKKGRDIDLKSAMDYVSGYTLALDMTSRDQQSIAKAKSLPWTVSKGYDTFCPISGFIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPHLIQYISSIMTLESGDLILTGTPSGVGPVKPGQVIKCGITGLDTDMQFDI 212          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_BOVIN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Bos taurus GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.669e-66
Identity = 118/204 (57.84%), Postives = 151/204 (74.02%), Query Frame = 2
Query:  152 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            G  IV VGRNYA H +E+ +A P EPVLFLKP+++Y   G  + VP    +LHHE+ELAVV+G++ R V E  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPHNL+LWLKV+GE+RQ+G T  MIF IPY+IS++S IMTL EGD+ILTGTP+GVGPVK   +I AGI G+L + F +E
Sbjct:   14 GKNIVCVGRNYADHVREMQSAAPSEPVLFLKPSTAYAPEGSPVLVPAYTRNLHHELELAVVMGKRCRAVSEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHNLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIMTLEEGDIILTGTPKGVGPVKENDEIQAGIHGVLSMKFKVE 217          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_PONAB (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Pongo abelii GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.106e-65
Identity = 117/204 (57.35%), Postives = 151/204 (74.02%), Query Frame = 2
Query:  152 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            G  IV VGRNYA H +E+ +AV  EPVLFLKP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWLKV+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI GL+ + F +E
Sbjct:   17 GKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGRRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMRFKVE 220          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Homo sapiens GN=FAHD1 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.106e-65
Identity = 117/204 (57.35%), Postives = 151/204 (74.02%), Query Frame = 2
Query:  152 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            G  IV VGRNYA H +E+ +AV  EPVLFLKP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWLKV+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI GL+ + F +E
Sbjct:   17 GKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVE 220          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_MOUSE (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Mus musculus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.443e-62
Identity = 111/204 (54.41%), Postives = 148/204 (72.55%), Query Frame = 2
Query:  152 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            G  IV VGRNYA H KE+ + V  EPVLFLKP+++Y   G  + +P    +LHHEVEL V++G++   +PE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWLKV+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI G++ + F ++
Sbjct:   20 GKNIVCVGRNYADHVKEMRSTVLSEPVLFLKPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGKRGEAIPEAAAMDYVAGYALCLDMTARDVQEECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVGPVKENDEIEAGIDGVVSMRFKVK 223          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: FAHD1_RAT (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Rattus norvegicus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.214e-62
Identity = 112/204 (54.90%), Postives = 147/204 (72.06%), Query Frame = 2
Query:  152 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            G  IV VGRNYA H KE+ + V  EPVLFLKP+++Y   G  + +P    +LHHEVEL V++G++   VPE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWLKV+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVG VK   +I AGI G++ + F +E
Sbjct:   14 GKNIVCVGRNYADHVKEMRSTVLSEPVLFLKPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGRRGEAVPEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVGAVKENDEIEAGIDGVVSMRFKVE 217          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y643_PYRHO (Uncharacterized protein PH0643 OS=Pyrococcus horikoshii GN=PH0643 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.308e-55
Identity = 104/202 (51.49%), Postives = 146/202 (72.28%), Query Frame = 2
Query:  155 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDI 760
            TKIVA+ +NYA HA+E+G+  P+EP++FLKP S+ +G G +I +P     + HEVELAV++G++A++VP + A DY+ GY + LD+TAR++Q+ A+  G PWT++KG DTF PI   +  S   DP +LE+ LKV+G+IRQ G T  MIFKIP LI +IS IMTL  GD+I TGTP GVGP++ G +I A I G+  + FD+
Sbjct:   21 TKIVALAKNYAEHAREMGSEPPEEPIIFLKPPSALIGPGSSIILPRRSKRVDHEVELAVIMGKRAKNVPASKAFDYILGYTIILDITARDLQAEARKKGYPWTISKGFDTFAPIGPRVVDSRELDPSDLEIGLKVNGKIRQLGRTSQMIFKIPELIEYISHIMTLEPGDIIATGTPPGVGPLRHGDRIEAWIEGIGKMEFDV 222          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: Y1397_PYRAB (Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi GN=PYRAB13970 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.889e-54
Identity = 102/195 (52.31%), Postives = 140/195 (71.79%), Query Frame = 2
Query:  155 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 739
            TKI+A+ +NYA HA+E+G+  P+EPV+FLKP S+ +G    I +P     + HEVELAV+IG++A++VP   A DY+ GY + LD+TAR++Q+ A+  G PWTV+KG DTF PI   +      DP +LE+ LKV+G++RQ G T +MIFKIP LI +ISSIMTL  GD+I TGTP GVGP++ G KI A + G+
Sbjct:   16 TKIIALAKNYAEHAREMGSEPPEEPVIFLKPPSALIGPNSVIVLPRRSKRVDHEVELAVIIGKRAKNVPAEKAFDYILGYTILLDITARDLQAEARKKGYPWTVSKGFDTFAPIGPRIVDKRELDPSDLEIGLKVNGKVRQLGRTSEMIFKIPELIEYISSIMTLEPGDIIATGTPPGVGPLRHGDKIEAWVEGI 210          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: YO23_CAEEL (Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans GN=ZK688.3 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.700e-51
Identity = 100/203 (49.26%), Postives = 135/203 (66.50%), Query Frame = 2
Query:  155 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVNFDIE 763
            TKIV VGRNY  HA ELGNA+PK+P+LF+K  +S++  G  I  P    +LH EVEL VVI +KA  + ++ AMDY+GGY VALDMTAR+ Q  AK AG PW +AK  D   PI   LP S +P+PH++EL+ K++G+ +Q+  T  MIF IP L+ + +   TL  GDV+LTGTP GV  +  G  I  G+T  L+  F+++
Sbjct:   12 TKIVCVGRNYKDHALELGNAIPKKPMLFVKTVNSFIVEGEPIVAPPGCQNLHQEVELGVVISKKASRISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAPWFLAKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFTLEVGDVVLTGTPAGVTKINSGDVIEFGLTDKLNSKFNVQ 214          
BLAST of DR404605 vs. ExPASy Swiss-Prot
Match: YOS9_SCHPO (Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe GN=SPBC21C3.09c PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.090e-45
Identity = 95/199 (47.74%), Postives = 133/199 (66.83%), Query Frame = 2
Query:  140 LIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKA---RDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITA 724
            L +AG K+V +GRNYAAH +EL N  P +P  FLKPTS+ +  G G + +P P  S H+EVEL +++  +    R V   + +D +G Y V +DMTAR IQ+ AK  GLPW+ AKG DTF P+  ++PK  +PDPHN+ L L ++G++ QK ST  M+ KIP + S I+  M+L  GD++LTGTP+GVGPV  G  ++A
Sbjct:    2 LSRAG-KVVCIGRNYAAHIRELNNPFPTKPFFFLKPTSAIVEPGHGNLIIP-PDVSAHYEVELGLIMKDRLPARRPVSSNSWLDSIGAYFVGIDMTARNIQNEAKKKGLPWSFAKGYDTFLPVGPIIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKIPKIFSSITEAMSLNPGDLVLTGTPKGVGPVVPGDILSA 198          
The following BLAST results are available for this feature:
BLAST of DR404605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FAHD1_DICDI1.219e-6962.26Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_BOVIN3.669e-6657.84Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_PONAB3.106e-6557.35Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_HUMAN3.106e-6557.35Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_MOUSE1.443e-6254.41Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_RAT3.214e-6254.90Fumarylacetoacetate hydrolase domain-containing pr... [more]
Y643_PYRHO1.308e-5551.49Uncharacterized protein PH0643 OS=Pyrococcus horik... [more]
Y1397_PYRAB1.889e-5452.31Uncharacterized protein PYRAB13970 OS=Pyrococcus a... [more]
YO23_CAEEL9.700e-5149.26Uncharacterized protein ZK688.3 OS=Caenorhabditis ... [more]
YOS9_SCHPO6.090e-4547.74Uncharacterized hydrolase C21C3.09c OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243N23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243N23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404605 ID=DR404605; Name=DR404605; organism=Citrus sinensis; type=EST; length=763bp
TGTGTTGGTCCCGNNNNNTCGGCCATTACGGCCGGGGGAACTGATGATGT
TGCTGGGTAGCTAGCACAGAACGAATTTTGGGTCAATCAGAATCAGAATC
GCTTAAGCGATGGCGACTGCATCATCAGCCGTACAAAAGCTCATTCAAGC
AGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCGGCTCACGCCAAAG
AGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTTTCTCAAACCGACG
TCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTACCTCATCCCCTGGA
TTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATCGGACAGAAAGCTC
GAGATGTGCCTGAAACCACTGCCATGGACTATGTTGGAGGCTATGCAGTG
GCACTTGATATGACTGCGAGGGAAATCCAATCTTCTGCCAAGTCTGCAGG
TCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTCACACCAATTAGCT
CTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAACCTGGAACTATGG
TTAAAGGTTGATGGAGAGATTCGACAGAAAGGCTCCACTAAGGATATGAT
TTTTAAGATACCATATCTAATTAGCCACATAAGTTCAATTATGACACTTT
TTGAAGGAGATGTCATATTAACAGGCACTCCACAGGGCGTTGGCCCTGTA
AAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCCTCCTGGATGTAAA
CTTTGATATTGAA
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