DR404599

Overview
NameDR404599
Unique NameDR404599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length440
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:38..477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.248e-38
Identity = 75/102 (73.53%), Postives = 79/102 (77.45%), Query Frame = 3
Query:  135 VAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            V +  S+S KDY DPPPEPLFDA EL KWSFYRALIAEFIA            IGYKSQTDPA N D C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINP
Sbjct:    6 VGDKRSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINP 107          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.182e-34
Identity = 69/108 (63.89%), Postives = 76/108 (70.37%), Query Frame = 3
Query:  123 EDTGVAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNV--DGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            E    AE   Y AKDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK Q+DP  N     C+GVGILGIAWAFGGMIF+LVYCTAG+SGGHINP
Sbjct:    6 EAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINP 113          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.518e-33
Identity = 70/102 (68.63%), Postives = 74/102 (72.55%), Query Frame = 3
Query:  141 EHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            E   +SAKDYTDPPP PL DA ELTKWS YRA+IAEFIA            IGYK QTD A +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINP
Sbjct:   12 EAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINP 113          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.595e-33
Identity = 71/112 (63.39%), Postives = 77/112 (68.75%), Query Frame = 3
Query:  117 MAED--TGVAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            MA+D      E   +SAKDYTDPPP PL D  ELTKWS YRA+IAEFIA            IGYK Q+D   N     C+GVGILGIAWAFGGMIF+LVYCTAGISGGHINP
Sbjct:    1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINP 112          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.337e-32
Identity = 71/112 (63.39%), Postives = 79/112 (70.54%), Query Frame = 3
Query:  117 MAEDTGVA--EHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            MA+D   +  E   +SAKDYTDPPP PL DA ELT+WS YRA+IAEFIA            IGYK QTD + +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINP
Sbjct:    1 MAKDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINP 112          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.978e-32
Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 3
Query:  117 MAEDTGVAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            MA+D  V E    +A+DY DPPP P FD  EL KW  YRA+IAEF+A            IGYK+QTD       C GVGILGIAWAFGGMIFVLVYCTAGISGGHINP
Sbjct:    1 MAKDLDVNESGPPAARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 108          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.132e-31
Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 3
Query:  117 MAEDTGVAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            MA+D   A  +++  KDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK QTD A +     C GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINP
Sbjct:    1 MAKDIEAA--AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINP 108          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.478e-31
Identity = 72/112 (64.29%), Postives = 76/112 (67.86%), Query Frame = 3
Query:  117 MAEDTG-VAEHSSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDG---CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            MA+D   V E   YSAKDY DPPP PL D  ELTKWS YRA IAEFIA            IGYK Q+D    + G   C GVGILGIAWAFGGMIF+LVYCTAGISGGHINP
Sbjct:    1 MAKDVEQVTEQGEYSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDT--KIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINP 110          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.521e-31
Identity = 66/100 (66.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:  153 YSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDG----CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +  G    C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINP
Sbjct:   16 FAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINP 115          
BLAST of DR404599 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.521e-31
Identity = 67/98 (68.37%), Postives = 71/98 (72.45%), Query Frame = 3
Query:  153 YSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDP-AKNVDG-CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINP 440
            ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD  A   D  C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINP
Sbjct:   16 FAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINP 113          
The following BLAST results are available for this feature:
BLAST of DR404599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP25_ARATH1.248e-3873.53Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ3.182e-3463.89Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE3.518e-3368.63Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ4.595e-3363.39Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE1.337e-3263.39Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP24_ARATH2.978e-3262.04Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_MAIZE1.132e-3160.91Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP27_MAIZE1.478e-3164.29Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP22_MAIZE2.521e-3166.00Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_MAIZE2.521e-3168.37Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243N15 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243N15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404599 ID=DR404599; Name=DR404599; organism=Citrus sinensis; type=EST; length=440bp
AAAACAACCAAAANNNNNNAAGAAAAAGAAAAAGGCTTCTCTCTCGTTGT
GCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAATCAT
TGTTACTGGTTTTCCAATGGCGGAGGACACTGGGGTGGCAGAGCACAGCT
CATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTATTCGAC
GCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCTGAGTT
CATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCATTGGCT
ACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCGGCGTC
GGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTCGT
TTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCG
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