DR404533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.362e-28 Identity = 50/60 (83.33%), Postives = 55/60 (91.67%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DCGGAC ARCRLSSRP LC+RACGTCCARCNCVPPGT+GNTE CPCYA++TTH +RKCP Sbjct: 45 DCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.079e-25 Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DCG AC ARCRLS RP LCHRACGTCC RCNCVPPGT GN + C CYA++TTH GRRKCP Sbjct: 39 DCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.013e-23 Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DCGG C+ RC SSRPNLC RAC +CC RCNCVPPGTAGN +CPCYA++TT GR KCP Sbjct: 40 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.547e-23 Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DCGG C+ RC SSR LC RAC +CC+RCNCVPPGT+GNT +CPCYA++TTH GR KCP Sbjct: 40 DCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 28/60 (46.67%), Postives = 31/60 (51.67%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DC C RC +S C C CCA C CVP G GN + CPCY N T G+ KCP Sbjct: 37 DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 29/60 (48.33%), Postives = 32/60 (53.33%), Query Frame = 1 Query: 127 DCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 DC C RC +S C C CCA+C CVP GT GN + CPCY N T G KCP Sbjct: 53 DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of DR404533 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11 Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 1 Query: 130 CGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 306 C C+ RC + + C + CG CC C CVP GT GN CPCY + G+ KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88 The following BLAST results are available for this feature:
BLAST of DR404533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404533 ID=DR404533; Name=DR404533; organism=Citrus sinensis; type=EST; length=578bpback to top |