DR404527

Overview
NameDR404527
Unique NameDR404527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.351e-72
Identity = 137/168 (81.55%), Postives = 152/168 (90.48%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 511
            IL+Q+  LGKGGSTAVT ILI+G+KLVVANVGDSRAV+SKNGVA QLSVDHEPSKEK+ IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK+HLSSEPD+  + I D TEFI+ ASDGIWKV++NQEAVD IK +KD  +AAKHLIE A+SRKSKDDISCIVVKFH
Sbjct:  116 ILQQSLKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKFH 283          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.498e-68
Identity = 134/167 (80.24%), Postives = 148/167 (88.62%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            IL++A  LGKGGSTAVTAILIN QKLVVANVGDSRAVI +NGVAK LSVDHEP+ EK  IE+RGGFVSN PGDVPRVDGQLAVARAFGDKSLK+HLSSEP V VE+I DD EF+ILASDG+WKVM+NQEAVD IK +KDAK+AAKHL E AV+RKS DDIS +VVKF
Sbjct:  122 ILDKADDLGKGGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNMEKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHLAEEAVARKSSDDISVVVVKF 288          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 1.709e-67
Identity = 130/169 (76.92%), Postives = 149/169 (88.17%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR 514
            ILEQ+  LGKGGSTAVT ILI+G+ LV+ANVGDSRAV+SKNGVA QLSVDHEPSKE++ IESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSS+PD++ E I  +TEFI+ ASDG+WKVM+NQEAVD IK +KD ++AAK LIE AVS++S DDISCIV  F R
Sbjct:  112 ILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRAVMSKNGVASQLSVDHEPSKEQKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSDPDIRDENIDHETEFILFASDGVWKVMSNQEAVDLIKSIKDPQAAAKELIEEAVSKQSTDDISCIVPCFLR 280          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.108e-66
Identity = 133/171 (77.78%), Postives = 149/171 (87.13%), Query Frame = 2
Query:    5 KILEQAFVLGKGGSTAVTAILI---NGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            KILE A  LG+GGSTAVTAILI   N   LVVANVGDSRAVISK+GVAKQLSVDHEP+KE+  IE +GGFVSN+PGDVPRVDGQLAVARAFGD+SLK HLSSEPDV  E I ++T+F+ILASDG+WKVM+NQEAVD IK  KDA++AAKHL E AV+RKSKDDISCIVVKF
Sbjct:  118 KILESAAELGRGGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNKERHSIEKKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKDDISCIVVKF 288          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.958e-57
Identity = 108/167 (64.67%), Postives = 132/167 (79.04%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            IL  +  LG+GGSTAVTAILING+KL +ANVGDSRAV+S  G   Q+S DHEP  E+  IE RGGFVSN+PGDVPRV+GQLAV+RAFGDK LK HLSSEPD+K   +   T+ ++LASDGIWKVMTN+EA++  + VKD + AAK L   A+ R+SKDDISC+VV+F
Sbjct:  114 ILSNSSDLGRGGSTAVTAILINGRKLWIANVGDSRAVLSHGGAITQMSTDHEPRTERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAFGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIARRVKDPQKAAKELTAEALRRESKDDISCVVVRF 280          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 110/169 (65.09%), Postives = 136/169 (80.47%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEP--SKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            ILE A  LG GGSTAVTAI+++G+ + VANVGDSRAV+ + G A QL+VDHEP  + E++ IE +GGFV+  PGDVPRV+GQLAVARAFGD+SLK HLSSEPDV+   I    EF+ILASDG+WKVM NQEAVD +K +KD ++AAK L   A++RKSKDDISCIV++F
Sbjct:  151 ILENAKQLGPGGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKSIKDPQAAAKRLTTEALARKSKDDISCIVIRF 319          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.960e-55
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVK 505
            IL  +  LG+GGSTAVTAIL+NG++L VANVGDSRAV+S+ G A Q+++DHEP  E+  IE +GGFVSN+PGDVPRV+GQLAV+RAFGDKSLK HL S+PDVK   I D T+ ++LASDG+WKVM NQEA+D  + +KD   AAK L   A+ R SKDDISCIVV+
Sbjct:  115 ILSHSSDLGRGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVR 280          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.835e-53
Identity = 107/167 (64.07%), Postives = 129/167 (77.25%), Query Frame = 2
Query:    8 ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            IL     LG+GGSTAVTAIL+NG+KL VANVGDSRAV+ K G   Q+S DH+P+ E+  IE+RGGFVSN+PGDVPRV GQLAV+RAFGD++LK  L SEPD+KVE I    E ++LASDG+WKVM NQE VD  K  KD ++AAK L   A+ R SKDDISC+VV+F
Sbjct:  116 ILSHTPDLGQGGSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDHDPNVERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQLTAEALKRDSKDDISCVVVRF 282          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51
Identity = 103/162 (63.58%), Postives = 129/162 (79.63%), Query Frame = 2
Query:   29 LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            L  GGSTAVTAILING+ L +ANVGDSRA++S  G AKQ+SVDH+P    E+ +IES+GGFV+N PGDVPRV+G LAV+R FGDK+LK +L+SEP++K   I   T+F+ILASDGI KVM+NQEAVD  K +KD K AA+ ++  A+ R SKDDISCIVV+F
Sbjct:  121 LESGGSTAVTAILINGKALWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAARQVVAEALKRNSKDDISCIVVRF 282          
BLAST of DR404527 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.422e-50
Identity = 98/159 (61.64%), Postives = 129/159 (81.13%), Query Frame = 2
Query:   35 KGGSTAVTAILINGQKLVVANVGDSRAVISKNG-VAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 508
            +GGSTAVTAI+I+G+K+VVANVGDSRA++ +   V KQ++VDHEP KE+ L++S+GGFVS  PG+VPRVDGQLA+ RAFGD  LK H+S  P++++  I DDT+F+ILASDG+WKVM+N E  D IK   +A+ AAK LI+ A++R SKDDISC+VV F
Sbjct:   76 RGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDKERDLVKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSNDEVWDQIKKRGNAEEAAKMLIDKALARGSKDDISCVVVSF 234          
The following BLAST results are available for this feature:
BLAST of DR404527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
P2C58_ARATH1.351e-7281.55Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C39_ARATH4.498e-6880.24Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C20_ARATH1.709e-6776.92Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C62_ORYSJ1.108e-6677.78Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C09_ARATH7.958e-5764.67Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C44_ORYSJ3.949e-5665.09Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C10_ARATH1.960e-5564.46Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C41_ORYSJ1.835e-5364.07Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C17_ARATH1.717e-5163.58Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C28_ARATH9.422e-5061.64Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243J23 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243J23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404527 ID=DR404527; Name=DR404527; organism=Citrus sinensis; type=EST; length=713bp
GGGTAAGATATTGGAGCAAGCATTTGTCCTGGGAAAAGGGGGATCAACAG
CAGTAACAGCAATTCTTATTAATGGTCAGAAACTAGTGGTTGCAAATGTG
GGAGATTCTCGGGCTGTTATATCCAAGAATGGTGTGGCCAAACAACTGTC
TGTTGACCACGAACCAAGCAAGGAAAAGAGACTGATTGAGAGCCGCGGTG
GCTTTGTATCGAACATTCCCGGGGATGTTCCACGTGTTGATGGGCAACTG
GCTGTAGCAAGGGCATTTGGTGACAAGAGTTTGAAAATACACCTTAGCTC
AGAACCTGATGTGAAAGTGGAGATGATTACTGATGATACAGAGTTCATAA
TACTAGCAAGTGATGGGATATGGAAGGTGATGACAAACCAAGAAGCTGTA
GACTGTATCAAACATGTAAAAGATGCTAAGTCAGCAGCAAAGCACTTGAT
AGAACACGCAGTTTCTAGGAAAAGTAAGGATGACATATCTTGCATAGTTG
TAAAGTTCCATCGATAAATTTTGTGGTCTGTCTTTGATGGAGGAAAATTA
TTAGACGAAATGTCTGTATATTGTGGATAAATTTGTTTCTGTAATTGTGG
AGATACATGAAATGTGTCACTAAACTGTTGTTTGCACGATAGAGCATTAT
GAAATTGATTGCTTGAATTTGAACTTCCAGTTAAGTTGAAAAAAAAAAAA
AAAAAAAAAAAAA
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